RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 VSIG4Q9Y279 399 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 INSIG2Q9Y5U4 225 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 NUBP2Q9Y5Y2 271 aa10.23□□□□□ -0.77
TRIM39-207ENST00000428404 WNK2Q9Y3S1 2297 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 hCG_1809904A0A1W2PP81 198 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 A0A1W2PPE2 198 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 A0A1W2PR64 198 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 A0A1W2PRV1 198 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 FAM172BPA6NC97 362 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 RGS11O94810 467 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 MMP9P14780 707 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 NFYBP25208 207 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 ECI1P42126 302 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 MECP2P51608 486 aaKnown RBP10.22□□□□□ -0.77
TRIM39-207ENST00000428404 DVL1P1P54792 670 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-207ENST00000428404 HERV-K104P61576 105 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 TRIM16LQ309B1 348 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 CT45A1Q5HYN5 189 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 ZDHHC22Q8N966 263 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 CT45A3Q8NHU0 189 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 MARCH1Q8TCQ1 289 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 EDARADDQ8WWZ3 215 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 TNFRSF14Q92956 283 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 CREB3L1Q96BA8 519 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 RTBDNQ9BSG5 229 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-207ENST00000428404 RSRP1Q9BUV0 290 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 SUCNR1Q9BXA5 334 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 MMP28Q9H239 520 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 TMEM133Q9H2Q1 129 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 FLVCR2Q9UPI3 526 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 PSG11Q9UQ72 335 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 OTOGQ6ZRI0 2925 aa10.22□□□□□ -0.77
TRIM39-207ENST00000428404 YLPM1P49750 1951 aaKnown RBP10.21□□□□□ -0.77
TRIM39-207ENST00000428404 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRIM39-207ENST00000428404 TRAV20A0A0B4J274 112 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 SLC31A2O15432 143 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 IGLV2-14P01704 120 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 OR8U9P0C7N5 309 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 IGHV4-31P0DP07 118 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 GNRHRP30968 328 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 LUMP51884 338 aaPredicted RBP10.21□□□□□ -0.77
TRIM39-207ENST00000428404 RAG2P55895 527 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 FXYD4P59646 89 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 MSMO1Q15800 293 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 TMEM249Q2WGJ8 235 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 PLET1Q6UQ28 207 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 BTNL3Q6UXE8 466 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 SLC25A48Q6ZT89 311 aaKnown RBP10.21□□□□□ -0.77
TRIM39-207ENST00000428404 LINC00311Q8N616 119 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 LINC01356Q8N9X3 169 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 OR8U1Q8NH10 309 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 LEAP2Q969E1 77 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 UPRTQ96BW1 309 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 MSI2Q96DH6 328 aaKnown RBP10.21□□□□□ -0.77
TRIM39-207ENST00000428404 SCGB3A2Q96PL1 93 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 ALX4Q9H161 411 aaPredicted RBP10.21□□□□□ -0.77
TRIM39-207ENST00000428404 C20orf85Q9H1P6 137 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 C5orf66Q9H5L9 145 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 LPAR2Q9HBW0 351 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 NUDT15Q9NV35 164 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 GAB2Q9UQC2 676 aa10.21□□□□□ -0.77
TRIM39-207ENST00000428404 FLNAP21333 2647 aaKnown RBP10.2□□□□□ -0.78
TRIM39-207ENST00000428404 J3QR06 171 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 IGHV3-7P01780 117 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 CTSDP07339 412 aaPredicted RBP10.2□□□□□ -0.78
TRIM39-207ENST00000428404 H2AFB2P0C5Z0 115 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 GATA3P23771 443 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 HCP5Q6MZN7 132 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 LPCAT3Q6P1A2 487 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 Q6ZNX1 250 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 SETXQ7Z333 2677 aaKnown RBP10.2□□□□□ -0.78
TRIM39-207ENST00000428404 SLC38A6Q8IZM9 456 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 ABHD12Q8N2K0 398 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 OR2AK2Q8NG84 335 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 OR11H6Q8NGC7 330 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 OR9G1Q8NH87 305 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 ZFAND1Q8TCF1 268 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 SECTM1Q8WVN6 248 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 TMEM186Q96B77 213 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 TBX15Q96SF7 602 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 ABHD14AQ9BUJ0 271 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 TEX15Q9BXT5 2789 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 SLC5A7Q9GZV3 580 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 IFI27L2Q9H2X8 130 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 CCL28Q9NRJ3 127 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 ZNF221Q9UK13 617 aa10.2□□□□□ -0.78
TRIM39-207ENST00000428404 TRAV6A0A075B6T7 132 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 IGHV2-26A0A0B4J1V2 119 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 A0A1W2PPE3 182 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 INMT-MINDY4F8WBC2 141 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 ARPC1BO15143 372 aaKnown RBP10.19□□□□□ -0.78
TRIM39-207ENST00000428404 ST8SIA5O15466 376 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 PROP1O75360 226 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 SLC22A5O76082 557 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 IGLV1-47P01700 117 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 PGAM2P15259 253 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 GZMKP49863 264 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 RAB7AP51149 207 aa10.19□□□□□ -0.78
TRIM39-207ENST00000428404 DLX1P56177 255 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms