RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 Q9N2K0 584 aa13.3□□□□□ -0.28
VRK2-204ENST00000428021 C12orf4Q9NQ89 552 aa13.3□□□□□ -0.28
VRK2-204ENST00000428021 ABRACLQ9P1F3 81 aa13.3□□□□□ -0.28
VRK2-204ENST00000428021 IGHV3-72A0A0B4J1Y9 119 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 SH2D7A6NKC9 451 aaPredicted RBP13.29□□□□□ -0.28
VRK2-204ENST00000428021 MFNGO00587 321 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 IGKV1D-33P01593 117 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 IGKV1-33P01594 117 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 HNF4GQ14541 408 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 HERPUD1Q15011 391 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 ABCA11PQ4W5N1 156 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 HIST2H2BDQ6DRA6 164 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 SFXN4Q6P4A7 337 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 IL1F10Q8WWZ1 152 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 YIPF6Q96EC8 236 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 ABHD14AQ9BUJ0 271 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 DAPK2Q9UIK4 370 aa13.29□□□□□ -0.28
VRK2-204ENST00000428021 ZNF736B4DX44 427 aaPredicted RBP13.28□□□□□ -0.28
VRK2-204ENST00000428021 LANCL1O43813 399 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 RRP9O43818 475 aaKnown RBP13.28□□□□□ -0.28
VRK2-204ENST00000428021 SCTP09683 121 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 SNRPBP14678 240 aaKnown RBP13.28□□□□□ -0.28
VRK2-204ENST00000428021 HIST1H1DP16402 221 aaKnown RBP13.28□□□□□ -0.28
VRK2-204ENST00000428021 GNB3P16520 340 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 TMEM11P17152 192 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 HLA-DRB3P79483 266 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 MXD1Q05195 221 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 HES1Q14469 280 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 IZUMO1Q8IYV9 350 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 LYG1Q8N1E2 194 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 Q8N6K4 173 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 RBMXL1Q96E39 390 aaKnown RBP13.28□□□□□ -0.28
VRK2-204ENST00000428021 EAF1Q96JC9 268 aaPredicted RBP13.28□□□□□ -0.28
VRK2-204ENST00000428021 PARP12Q9H0J9 701 aaKnown RBP13.28□□□□□ -0.28
VRK2-204ENST00000428021 MOB4Q9Y3A3 225 aa13.28□□□□□ -0.28
VRK2-204ENST00000428021 IGKV1-6A0A0C4DH72 117 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 METTL21EPA6NDL7 271 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 M0QZK8 103 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 RGS11O94810 467 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 CD1BP29016 333 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 VDAC2P45880 294 aaPredicted RBP13.27□□□□□ -0.29
VRK2-204ENST00000428021 TGIF2LXQ8IUE1 241 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 C5orf56Q8N8D9 126 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 C11orf44Q8N8P7 122 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 IFI27L2Q9H2X8 130 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 OR1A1Q9P1Q5 309 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 MGAT4AQ9UM21 535 aa13.27□□□□□ -0.29
VRK2-204ENST00000428021 TET2Q6N021 2002 aaPredicted RBP13.27□□□□□ -0.29
VRK2-204ENST00000428021 TXNL1O43396 289 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 LPLP06858 475 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 CD3GP09693 182 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 TGFBR1P36897 503 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 OR3A3P47888 321 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 TREML4Q6UXN2 200 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 ZNF833PQ6ZTB9 187 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 OR2AK2Q8NG84 335 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 LGALS14Q8TCE9 139 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 ATG5Q9H1Y0 275 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 VCX3AQ9NNX9 186 aa13.26□□□□□ -0.29
VRK2-204ENST00000428021 ELF5Q9UKW6 265 aaPredicted RBP13.26□□□□□ -0.29
VRK2-204ENST00000428021 A0A075B6Q4 140 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 SERPINE3A8MV23 424 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 TRDCB7Z8K6 153 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 M0QZ24 198 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 ITGB1BP1O14713 200 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 ST8SIA5O15466 376 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 FGF16O43320 207 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 FCGR3AP08637 254 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 CEACAM6P40199 344 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 ARSJQ5FYB0 599 aaPredicted RBP13.25□□□□□ -0.29
VRK2-204ENST00000428021 OR5H6Q8NGV6 325 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 OR2T10Q8NGZ9 312 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 NABP2Q9BQ15 211 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 ZNF251Q9BRH9 671 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 AGMATQ9BSE5 352 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.25□□□□□ -0.29
VRK2-204ENST00000428021 PLSCR3Q9NRY6 295 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 SLC23A1Q9UHI7 598 aa13.25□□□□□ -0.29
VRK2-204ENST00000428021 SAA2-SAA4A0A096LPE2 208 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 AIREO43918 545 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 TSPAN15O95858 294 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 MOSP00540 346 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 SAA2P0DJI9 122 aaPredicted RBP13.24□□□□□ -0.29
VRK2-204ENST00000428021 SMIM18P0DKX4 95 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 CD28P10747 220 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 LSAMPQ13449 338 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 TIMM50Q3ZCQ8 353 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 CDNFQ49AH0 187 aa13.24□□□□□ -0.29
VRK2-204ENST00000428021 MRPL20Q9BYC9 149 aaKnown RBP13.24□□□□□ -0.29
VRK2-204ENST00000428021 C11orf54Q9H0W9 315 aaPredicted RBP13.24□□□□□ -0.29
VRK2-204ENST00000428021 ZNF230Q9UIE0 474 aaPredicted RBP13.24□□□□□ -0.29
VRK2-204ENST00000428021 FBXO24O75426 580 aa13.23□□□□□ -0.29
VRK2-204ENST00000428021 ZBTB25P24278 435 aa13.23□□□□□ -0.29
VRK2-204ENST00000428021 SCAND1P57086 179 aa13.23□□□□□ -0.29
VRK2-204ENST00000428021 MRPS15P82914 257 aaKnown RBP13.23□□□□□ -0.29
VRK2-204ENST00000428021 C9orf152Q5JTZ5 239 aa13.23□□□□□ -0.29
VRK2-204ENST00000428021 IDNKQ5T6J7 187 aa13.23□□□□□ -0.29
VRK2-204ENST00000428021 Q8N9W7 124 aa13.23□□□□□ -0.29
VRK2-204ENST00000428021 OR4A4PQ8NGN8 299 aa13.23□□□□□ -0.29
VRK2-204ENST00000428021 MAFIPQ8WZ33 124 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms