RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 ABHD14AQ9BUJ0 271 aa12.3□□□□□ -0.44
VARS2-203ENST00000428017 NECAP2Q9NVZ3 263 aa12.3□□□□□ -0.44
VARS2-203ENST00000428017 SOX21Q9Y651 276 aaPredicted RBP12.3□□□□□ -0.44
VARS2-203ENST00000428017 MTORP42345 2549 aa12.3□□□□□ -0.44
VARS2-203ENST00000428017 TRBV6-7A0A0A0MS04 114 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 IGKV1-6A0A0C4DH72 117 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 TAS2R46P59540 309 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 CT45A1Q5HYN5 189 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 SLC25A48Q6ZT89 311 aaKnown RBP12.29□□□□□ -0.44
VARS2-203ENST00000428017 LYG1Q8N1E2 194 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 LINC00311Q8N616 119 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 SIGLECL1Q8N7X8 197 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 ZNF439Q8NDP4 499 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 OR52I2Q8NH67 350 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 CT45A3Q8NHU0 189 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 TOMM40LQ969M1 308 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 JMJD8Q96S16 334 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 RDH8Q9NYR8 311 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 RBM7Q9Y580 266 aaKnown RBP12.29□□□□□ -0.44
VARS2-203ENST00000428017 HILPDAQ9Y5L2 63 aa12.29□□□□□ -0.44
VARS2-203ENST00000428017 MDFIC2A0A1B0GVS7 189 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 BTBD17A6NE02 478 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 GABARAPH6UMI1 98 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 CTDSPLO15194 276 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 SLC31A2O15432 143 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 BAMBIQ13145 260 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 PYDC2Q56P42 97 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 TPTE2P1Q5T6R2 138 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 CCDC144NLQ6NUI1 221 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 OR5AP2Q8NGF4 316 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 OR5H2Q8NGV7 314 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 C17orf50Q8WW18 174 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 SNAPC3Q92966 411 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 ABCB10Q9NRK6 738 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 PTTG2Q9NZH5 202 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 ZNRD1Q9P1U0 126 aa12.28□□□□□ -0.44
VARS2-203ENST00000428017 TEP1Q99973 2627 aaKnown RBP12.27□□□□□ -0.44
VARS2-203ENST00000428017 OOSP1A8MZH6 123 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 ITGB1BP1O14713 200 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 ST8SIA5O15466 376 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 TCF21O43680 179 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 PTBP1P26599 531 aaKnown RBP eCLIP12.27□□□□□ -0.451e-7■■■■■ 29.2
VARS2-203ENST00000428017 HLA-DMAP28067 261 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 ZNF134P52741 427 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 DGCR2P98153 550 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 PLA1AQ53H76 456 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 ACTBL2Q562R1 376 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 CCDC190Q86UF4 302 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 SMIM4Q8WVI0 70 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 ZNF48Q96MX3 618 aaPredicted RBP12.27□□□□□ -0.45
VARS2-203ENST00000428017 C11orf54Q9H0W9 315 aaPredicted RBP12.27□□□□□ -0.45
VARS2-203ENST00000428017 DPAGT1Q9H3H5 408 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 GHITMQ9H3K2 345 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 KLK11Q9UBX7 282 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 MTFP1Q9UDX5 166 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 ZNF221Q9UK13 617 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 ANAPC10Q9UM13 185 aa12.27□□□□□ -0.45
VARS2-203ENST00000428017 FN1P02751 2386 aaKnown RBP12.27□□□□□ -0.45
VARS2-203ENST00000428017 DSCAML1Q8TD84 2053 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 KIAA2026Q5HYC2 2103 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 ZNF736B4DX44 427 aaPredicted RBP12.26□□□□□ -0.45
VARS2-203ENST00000428017 HSD17B6O14756 317 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 PMP2P02689 132 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 GAPDHP04406 335 aaKnown RBP12.26□□□□□ -0.45
VARS2-203ENST00000428017 OR5H8P0DN80 308 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 NAT1P18440 290 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 BRS3P32247 399 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 SSBP1Q04837 148 aaKnown RBP12.26□□□□□ -0.45
VARS2-203ENST00000428017 CDK10Q15131 360 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 LRRC75BQ2VPJ9 315 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 Q6YL49 198 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 H1FOOQ8IZA3 346 aaPredicted RBP12.26□□□□□ -0.45
VARS2-203ENST00000428017 SSMEM1Q8WWF3 244 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 S1PR3Q99500 378 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 SOSTQ9BQB4 213 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 MEGF9Q9H1U4 602 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 TAS2R8Q9NYW2 309 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 EHFQ9NZC4 300 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 PIPOXQ9P0Z9 390 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 V9GYH0 126 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 NAV3Q8IVL0 2385 aa12.26□□□□□ -0.45
VARS2-203ENST00000428017 NSD1Q96L73 2696 aaPredicted RBP12.25□□□□□ -0.45
VARS2-203ENST00000428017 A0A0A6YYJ9 748 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 LY6LH3BQJ8 138 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 RAB29O14966 203 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 TXNL1O43396 289 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 GSTZ1O43708 216 aaPredicted RBP12.25□□□□□ -0.45
VARS2-203ENST00000428017 IFNA6P05013 189 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 OR8U9P0C7N5 309 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 NFYAP23511 347 aaPredicted RBP12.25□□□□□ -0.45
VARS2-203ENST00000428017 FCGR2CP31995 323 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 HRH1P35367 487 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 ETV6P41212 452 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 GPR12P47775 334 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 LDLRAD2Q5SZI1 272 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 LDLRAD3Q86YD5 345 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 TGIF2LXQ8IUE1 241 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 OR8U1Q8NH10 309 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 FAM216AQ8WUB2 273 aa12.25□□□□□ -0.45
VARS2-203ENST00000428017 AJUBAQ96IF1 538 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms