RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SLURP1P55000 103 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 HTD2P86397 168 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MOGAT2Q3SYC2 334 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ACTBL2Q562R1 376 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 AWAT2Q6E213 333 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 UNQ5815/PRO19632Q6UWF5 114 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 GLIPR1L1Q6UWM5 242 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZNF439Q8NDP4 499 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZNF555Q8NEP9 628 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 NPBQ8NG41 125 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ARPC1AQ92747 370 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RNF5Q99942 180 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 SELENOIQ9C0D9 397 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TOLLIPQ9H0E2 274 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 AMBNQ9NP70 447 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 BABAM2Q9NXR7 383 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 NKX1-2Q9UD57 310 aaPredicted RBP9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 A3GALT2U3KPV4 340 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 KIAA2026Q5HYC2 2103 aa9.5□□□□□ -0.89
HLA-DQB3-203ENST00000425319 UBE2QL1A1L167 161 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MAGEA13PA6NCF6 341 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 A8MZ25 164 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 E9PI62 339 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 EI24O14681 340 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 CRTAPO75718 401 aaPredicted RBP9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MAS1P04201 325 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TFAP2AP05549 437 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ARSBP15848 533 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 VHLP40337 213 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 GTF2A1P52655 376 aaPredicted RBP9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TPPP2P59282 170 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 KIAA0141Q14154 515 aaPredicted RBP9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 AKIRIN2Q53H80 203 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 YIF1BQ5BJH7 314 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 LY6G6FQ5SQ64 297 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 FAM71F2Q6NXP2 309 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZFP1Q6P2D0 407 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 PPP1R27Q86WC6 154 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 OR52I1Q8NGK6 324 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 OR1L1Q8NH94 360 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RHOXF1Q8NHV9 184 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 NABP2Q9BQ15 211 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 C9orf16Q9BUW7 83 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MRPS18AQ9NVS2 196 aaKnown RBP9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 GHRLQ9UBU3 117 aa9.49□□□□□ -0.89
HLA-DQB3-203ENST00000425319 OR5H14A6NHG9 310 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TRIM64CA6NLI5 447 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RRHO14718 337 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 IGHV4-30-4P0DP06 118 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RCC1P18754 421 aaPredicted RBP9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 CAPGP40121 348 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 VEGFCP49767 419 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 CX3CL1P78423 397 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 Q499Y3 187 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 CD200R1LQ6Q8B3 271 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 OR52L2PQ8NGH6 319 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MUL1Q969V5 352 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TSNAXQ99598 290 aaKnown RBP9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TM2D3Q9BRN9 247 aa9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 CHMP1AQ9HD42 196 aaPredicted RBP9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RCC2Q9P258 522 aaKnown RBP9.48□□□□□ -0.89
HLA-DQB3-203ENST00000425319 IGHV4OR15-8A0A075B7B6 117 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 A0A087WW49 117 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 LOC100130705A0A1B0GUX0 176 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 SLC22A1O15245 554 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 OGG1O15527 345 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 NDUFA3O95167 84 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 CNIH1O95406 144 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TRGV3P03979 118 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MGMTP16455 207 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 PPP1CCP36873 323 aaKnown RBP9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 RANBP1P43487 201 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TAS2R43P59537 309 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 LCN12Q6JVE5 192 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 FAM53AQ6NSI3 398 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ZNF562Q6V9R5 426 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 IL1F10Q8WWZ1 152 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 EDARADDQ8WWZ3 215 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 GHSRQ92847 366 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 SMIM19Q96E16 107 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TMEM68Q96MH6 324 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MS4A10Q96PG2 267 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 TMED9Q9BVK6 235 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MRPL20Q9BYC9 149 aaKnown RBP9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 FBXL15Q9H469 300 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 FGF20Q9NP95 211 aaPredicted RBP9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 CNOT2Q9NZN8 540 aaKnown RBP9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 MGAT4AQ9UM21 535 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 EXOSC1Q9Y3B2 195 aaKnown RBP9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 WASHC3Q9Y3C0 194 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 NUBP2Q9Y5Y2 271 aa9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 KMT2CQ8NEZ4 4911 aaKnown RBP9.47□□□□□ -0.89
HLA-DQB3-203ENST00000425319 ERICH4A6NGS2 130 aa9.46□□□□□ -0.9
HLA-DQB3-203ENST00000425319 SLC25A17O43808 307 aa9.46□□□□□ -0.9
HLA-DQB3-203ENST00000425319 PDCD6O75340 191 aa9.46□□□□□ -0.9
HLA-DQB3-203ENST00000425319 UBBP0CG47 229 aa9.46□□□□□ -0.9
HLA-DQB3-203ENST00000425319 AADACP22760 399 aa9.46□□□□□ -0.9
HLA-DQB3-203ENST00000425319 MAPK3P27361 379 aaPredicted RBP9.46□□□□□ -0.9
HLA-DQB3-203ENST00000425319 CRIP2P52943 208 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms