RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 BOKQ9UMX3 212 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-204ENST00000424143 A0A087X0M5 115 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 A0A1B0GX30 115 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 TNFSF12O43508 249 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 HRASP01112 189 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 SERPINA7P05543 415 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 RFPL3SP0C7P2 107 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 FOSL1P15407 271 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 CCKARP32238 428 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 TAS2R60P59551 318 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 RPL23P62829 140 aaKnown RBP12.9□□□□□ -0.34
C9orf3-204ENST00000424143 LCN2P80188 198 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 SLC38A11Q08AI6 406 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 CLN3Q13286 438 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 VWC2Q2TAL6 325 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 WIPI1Q5MNZ9 446 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-204ENST00000424143 SSX7Q7RTT5 188 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 PPP1R32Q7Z5V6 425 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 CISD2Q8N5K1 135 aaKnown RBP12.9□□□□□ -0.34
C9orf3-204ENST00000424143 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 TMEM147Q9BVK8 224 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 CHODLQ9H9P2 273 aa12.9□□□□□ -0.34
C9orf3-204ENST00000424143 C5orf49A4QMS7 147 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 H7BYZ3 331 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 AMBPP02760 352 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 PLP2Q04941 152 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 HLA-BQ31612 363 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 C16orf82Q7Z2V1 217 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 RPP25LQ8N5L8 163 aaKnown RBP12.89□□□□□ -0.35
C9orf3-204ENST00000424143 OR51H1Q8NH63 302 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 GPHA2Q96T91 129 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 RBKSQ9H477 322 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 CRIM1Q9NZV1 1036 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 IL36RNQ9UBH0 155 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 TP53TG5Q9Y2B4 290 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 NCKAP5O14513 1909 aa12.89□□□□□ -0.35
C9orf3-204ENST00000424143 A8MWP6 167 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 PPP5D1E7EU14 171 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 H3BP45 60 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 GZMBP10144 247 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 TNFRSF9Q07011 255 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 Q3ZCU0 254 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 C5orf24Q7Z6I8 188 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 CIB3Q96Q77 187 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-204ENST00000424143 DIRC2Q96SL1 478 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 PRRG4Q9BZD6 226 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 PILRBQ9UKJ0 227 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 TRAPPC6AO75865 159 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 WISP2O76076 250 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 MDKP21741 143 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-204ENST00000424143 GALR1P47211 349 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 CYB561P49447 251 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 COL10A1Q03692 680 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 ACTL10Q5JWF8 245 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 CDCP2Q5VXM1 449 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 SNX22Q96L94 193 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 TXNDC17Q9BRA2 123 aa12.88□□□□□ -0.35
C9orf3-204ENST00000424143 ZNF552Q9H707 407 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-204ENST00000424143 DNAH14Q0VDD8 3507 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 SYNGR4O95473 234 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 IAPPP10997 89 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 GDF1P27539 372 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 LHX2P50458 406 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 Q0VFX4 171 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 EIF4EBP1Q13541 118 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-204ENST00000424143 SSPNQ14714 243 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 FAM173AQ9BQD7 235 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 NDUFAF3Q9BU61 184 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 UBE2ZQ9H832 354 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-204ENST00000424143 DEPPQ9NTK1 212 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 POLDIP2Q9Y2S7 368 aa12.87□□□□□ -0.35
C9orf3-204ENST00000424143 PMS2P5A8MQ11 134 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 TMPRSS2O15393 492 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 ST8SIA5O15466 376 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 NXPH3O95157 252 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 COX5AP20674 150 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 FGF8P55075 233 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-204ENST00000424143 CLDN18P56856 261 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 HNF4GQ14541 408 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 ZNF146Q15072 292 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 ADIRFQ15847 76 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 PMS2CLQ68D20 193 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-204ENST00000424143 FGFRL1Q8N441 504 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 WDR31Q8NA23 367 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 FAM216AQ8WUB2 273 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 RDH5Q92781 318 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 NEIL1Q96FI4 390 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-204ENST00000424143 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-204ENST00000424143 OR6C3Q9NZP0 311 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 OR1A1Q9P1Q5 309 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 LAMP3Q9UQV4 416 aa12.86□□□□□ -0.35
C9orf3-204ENST00000424143 HS3ST1O14792 307 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 RD3LP0DJH9 198 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 CCL4P13236 92 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 PI4KAP42356 2102 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 NUBP1P53384 320 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 GNB2P62879 340 aa12.85□□□□□ -0.35
C9orf3-204ENST00000424143 SPANXN5Q5MJ07 72 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms