RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 KIR2DS4P43632 304 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 KCNJ3P48549 501 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 DLX1P56177 255 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 KIR2DS1Q14954 304 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 LCN15Q6UWW0 184 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 C11orf53Q8IXP5 236 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 DRAM1Q8N682 238 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 OR4D5Q8NGN0 318 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 PHYHIPLQ96FC7 376 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 CLN8Q9UBY8 286 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 PROCRQ9UNN8 238 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 ZFYVE26Q68DK2 2539 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 UTP20O75691 2785 aaKnown RBP10.03□□□□□ -0.8
PTPRN-204ENST00000423636 SH2D1BO14796 132 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 JTBO76095 146 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 RPL35P42766 123 aaKnown RBP10.03□□□□□ -0.8
PTPRN-204ENST00000423636 F2RL1P55085 397 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 OR2B8PP59922 312 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 IL24Q13007 206 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 ZADH2Q8N4Q0 377 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 C5orf30Q96GV9 206 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 IGHV2OR16-5A0A0B4J2B6 119 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 OR5B21A6NL26 309 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 CA11O75493 328 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 IGKV1-5P01602 117 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 HBZP02008 142 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 HEXAP06865 529 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 MPV17LQ2QL34 196 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 Q3ZCU0 254 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 KRBOX4Q5JUW0 171 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 URGCP-MRPS24S4R325 110 aa10.02□□□□□ -0.8
PTPRN-204ENST00000423636 GPR137BO60478 399 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 CDS2O95674 445 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 CCL8P80075 99 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 WDR82Q6UXN9 313 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 CCDC54Q8NEL0 328 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 ASB13Q8WXK3 278 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 SARAFQ96BY9 339 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 COQ2Q96H96 371 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 MMP26Q9NRE1 261 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 C17orf98A8MV24 154 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 CYB5R3P00387 301 aaPredicted RBP10.02□□□□□ -0.81
PTPRN-204ENST00000423636 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 CLCC1Q96S66 551 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 TMED3Q9Y3Q3 217 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 POMT1Q9Y6A1 747 aa10.02□□□□□ -0.81
PTPRN-204ENST00000423636 ZNF727A8MUV8 499 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 TRIM77I1YAP6 450 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 PGA5P0DJD9 388 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 COX5BP10606 129 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 SULT1A2P50226 295 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 NRN1LQ496H8 165 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 BHLHA15Q7RTS1 189 aaPredicted RBP10.01□□□□□ -0.81
PTPRN-204ENST00000423636 WFDC8Q8IUA0 241 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 CD177Q8N6Q3 437 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 ABHD17AQ96GS6 310 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 C19orf12Q9NSK7 152 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 HCFC1P51610 2035 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 BORCS7-ASMTA0A0B4J1R7 106 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 LRP5LA4QPB2 252 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 S1PR2O95136 353 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 CLDN1O95832 211 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 LYL1P12980 280 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 PVALBP20472 110 aaPredicted RBP10.01□□□□□ -0.81
PTPRN-204ENST00000423636 PAX9P55771 341 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 GUK1Q16774 197 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 ZNF585BQ52M93 769 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 RPL39P5Q59GN2 51 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 H1FOOQ8IZA3 346 aaPredicted RBP10.01□□□□□ -0.81
PTPRN-204ENST00000423636 RXFP4Q8TDU9 374 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 OR2V2Q96R30 315 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 FAM215AQ9Y5M1 114 aa10.01□□□□□ -0.81
PTPRN-204ENST00000423636 ZFP92A6NM28 416 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 MYOD1P15172 320 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 PTAFRP25105 342 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 CLEC12BQ2HXU8 276 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 OR8G5Q8NG78 346 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 MARVELD3Q96A59 401 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 TECTBQ96PL2 329 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 KCNJ16Q9NPI9 418 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 PTPRBP23467 1997 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 VDAC1P21796 283 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 ECI1P42126 302 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 NMSQ5H8A3 153 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 BTNL8Q6UX41 500 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 ZNF497Q6ZNH5 498 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 SVBPQ8N300 66 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 SMIM8Q96KF7 97 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 FAM212BQ9NTI7 297 aaPredicted RBP10□□□□□ -0.81
PTPRN-204ENST00000423636 MED9Q9NWA0 146 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 CACFD1Q9UGQ2 172 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 WSB1Q9Y6I7 421 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 PRR33A8MZF0 331 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 GNG10P50151 68 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 ZNF295-AS1Q8N0V1 137 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 SNIP1Q8TAD8 396 aaKnown RBP10□□□□□ -0.81
PTPRN-204ENST00000423636 ITLN1Q8WWA0 313 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 C14orf79Q96F83 325 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 HINT2Q9BX68 163 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 PLEKHA2Q9HB19 425 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms