RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 A6NHS1 94 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 LEUTXA8MZ59 168 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 LY6LH3BQJ8 138 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 HSPA12AO43301 675 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 HOXA3O43365 443 aaPredicted RBP7.5□□□□□ -1.21
PDGFC-202ENST00000422544 YPEL1O60688 119 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 ZBTB25P24278 435 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 PRSS3P35030 304 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 CEACAM6P40199 344 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 HILS1P60008 231 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 HERPUD1Q15011 391 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 PLA1AQ53H76 456 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 STEAP3Q658P3 488 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 CNIH2Q6PI25 160 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 Q6ZS49 121 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 HOGA1Q86XE5 327 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 ZDHHC22Q8N966 263 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 ZNF439Q8NDP4 499 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 OR4A4PQ8NGN8 299 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 YPEL2Q96QA6 119 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 OCSTAMPQ9BR26 566 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 PARP12Q9H0J9 701 aaKnown RBP7.5□□□□□ -1.21
PDGFC-202ENST00000422544 MEGF9Q9H1U4 602 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 ESM1Q9NQ30 184 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 ADAM30Q9UKF2 790 aa7.5□□□□□ -1.21
PDGFC-202ENST00000422544 A0A0A6YYJ9 748 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 BET1O15155 118 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 RGS11O94810 467 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 IGHV4-59P01825 116 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 TNFSF8P32971 234 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 CEACAM3P40198 252 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 CBX5P45973 191 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 IER3P46695 156 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 RAB13P51153 203 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 DIAPH2-AS1Q14236 149 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 SLC9A3R2Q15599 337 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 Q3ZCU0 254 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 LY6G6FQ5SQ64 297 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 TPTE2P1Q5T6R2 138 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 SLC25A48Q6ZT89 311 aaKnown RBP7.49□□□□□ -1.21
PDGFC-202ENST00000422544 LDLRAD3Q86YD5 345 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 LINC00311Q8N616 119 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 C8orf31Q8N9H6 132 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 CREB3L1Q96BA8 519 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 DIRAS2Q96HU8 199 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 ABHD1Q96SE0 405 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 SSX3Q99909 188 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 ABHD14AQ9BUJ0 271 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 MMP27Q9H306 513 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 RDH8Q9NYR8 311 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 ANXA10Q9UJ72 324 aa7.49□□□□□ -1.21
PDGFC-202ENST00000422544 AMMECR1Q9Y4X0 333 aaPredicted RBP7.49□□□□□ -1.21
PDGFC-202ENST00000422544 TRBV6-7A0A0A0MS04 114 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 DNAJC9-AS1A6NH13 148 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 ST8SIA5O15466 376 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 LPLP06858 475 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 REG1BP48304 166 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 LRRC75BQ2VPJ9 315 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 RNASE12Q5GAN4 147 aaKnown RBP7.48□□□□□ -1.21
PDGFC-202ENST00000422544 LYG1Q8N1E2 194 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 BEST4Q8NFU0 473 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 OR2AK2Q8NG84 335 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 OR10J5Q8NHC4 309 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 PIFOQ8TCI5 191 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 GPX8Q8TED1 209 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 SSMEM1Q8WWF3 244 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 SNAPC3Q92966 411 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 TOMM40LQ969M1 308 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 RPEQ96AT9 228 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 JMJD8Q96S16 334 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 GINS4Q9BRT9 223 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 CABLES2Q9BTV7 478 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 C11orf54Q9H0W9 315 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-202ENST00000422544 DPAGT1Q9H3H5 408 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 IFT46Q9NQC8 304 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 RNF150Q9ULK6 438 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 A3GALT2U3KPV4 340 aa7.48□□□□□ -1.21
PDGFC-202ENST00000422544 FABP12A6NFH5 140 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 VGLL3A8MV65 326 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 H3BUX3 64 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 CLDN34H7C241 214 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 J3QRK9 145 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 SULT1C2O00338 296 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 TPPPO94811 219 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 CTXN2P0C2S0 81 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 CD24P25063 80 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 IL3RAP26951 378 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 S100A5P33763 92 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 ARPC4P59998 168 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 UBA52P62987 128 aaKnown RBP7.47□□□□□ -1.21
PDGFC-202ENST00000422544 IL18Q14116 193 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 LY6EQ16553 131 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 LYSMD2Q8IV50 215 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 ODF3L1Q8IXM7 274 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 OR52I2Q8NH67 350 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 ST6GALNAC6Q969X2 333 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 ABHD14BQ96IU4 210 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 SOSTQ9BQB4 213 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 IFI27L2Q9H2X8 130 aa7.47□□□□□ -1.21
PDGFC-202ENST00000422544 SCPEP1Q9HB40 452 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms