RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CTAG1AP78358 180 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 GMPPAQ96IJ6 420 aaPredicted RBP10.74□□□□□ -0.69
CLCN4-203ENST00000421085 TRAV38-1A0A0B4J264 116 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 DHRS7CA6NNS2 312 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 GCM2O75603 506 aaPredicted RBP10.74□□□□□ -0.69
CLCN4-203ENST00000421085 KBTBD11O94819 623 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 DMRTA1Q5VZB9 504 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 MOGAT3Q86VF5 341 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 TAF15Q92804 592 aaKnown RBP eCLIP10.74□□□□□ -0.69
CLCN4-203ENST00000421085 GPR35Q9HC97 309 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 PCOLCE2Q9UKZ9 415 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 SHISA7A6NL88 538 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 IGKV1D-16P01601 117 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 SMAD4Q13485 552 aaKnown RBP10.74□□□□□ -0.69
CLCN4-203ENST00000421085 GFRALQ6UXV0 394 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 SFTPA1Q8IWL2 248 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 SDHCQ99643 169 aaPredicted RBP10.74□□□□□ -0.69
CLCN4-203ENST00000421085 WFDC6Q9BQY6 131 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 TMEM208Q9BTX3 173 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 WIPI2Q9Y4P8 454 aa10.74□□□□□ -0.69
CLCN4-203ENST00000421085 CEACAM3P40198 252 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 FXYD3Q14802 87 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 TMEM52Q8NDY8 209 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 SLX4Q8IY92 1834 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 SCN1AP35498 2009 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 ASAH2BP0C7U1 165 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 FOLR2P14207 255 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 COL9A1P20849 921 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 SRIP30626 198 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 HOXA4Q00056 320 aaPredicted RBP10.73□□□□□ -0.69
CLCN4-203ENST00000421085 SPANXN1Q5VSR9 72 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 RBPMS2Q6ZRY4 209 aaKnown RBP10.73□□□□□ -0.69
CLCN4-203ENST00000421085 FAM181AQ8N9Y4 354 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 OR1L8Q8NGR8 309 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 RBKSQ9H477 322 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 DSPPQ9NZW4 1301 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 LMX1BO60663 402 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 CA11O75493 328 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 LGALS7P47929 136 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 KIAA1644Q3SXP7 199 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 CDK5RAP2Q96SN8 1893 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 AMELYQ99218 206 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 PARLQ9H300 379 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 TMEM183AQ8IXX5 376 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 SPEM1Q8N4L4 309 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 C5orf66Q9H5L9 145 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 A0A1W2PPE3 182 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 OR2A4O95047 310 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 SCTP09683 121 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 SSPNQ14714 243 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 C3AR1Q16581 482 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 OR2A7Q96R45 310 aa10.73□□□□□ -0.69
CLCN4-203ENST00000421085 TRAV17A0A0B4J275 112 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 ARRDC1-AS1Q9H2J1 176 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 HIGD1AQ9Y241 93 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 ERVFRD-1P60508 538 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 TMEM108Q6UXF1 575 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 IGHV3OR15-7A0A075B7D8 119 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 PIN1P1O15428 100 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 AGFG2O95081 481 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 HTN1P15515 57 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 RHBDD2Q6NTF9 364 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 R4GN57 208 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 TMEM265A0A087WTH1 108 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 IL11P20809 199 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 PGLYRP4Q96LB8 373 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 HIST1H4GQ99525 98 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 RPP25Q9BUL9 199 aaKnown RBP10.72□□□□□ -0.69
CLCN4-203ENST00000421085 F11RQ9Y624 299 aaKnown RBP10.72□□□□□ -0.69
CLCN4-203ENST00000421085 TMEM189A5PLL7 270 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 HPRT1P00492 218 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 HIKESHIQ53FT3 197 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 LILRA6Q6PI73 481 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 GUCD1Q96NT3 240 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 TXNDC17Q9BRA2 123 aa10.72□□□□□ -0.69
CLCN4-203ENST00000421085 NUDT16L1Q9BRJ7 211 aaKnown RBP10.72□□□□□ -0.69
CLCN4-203ENST00000421085 SPAG17Q6Q759 2223 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 MKRN2OSH3BPM6 223 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 UPK3AO75631 287 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 EML2O95834 649 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 ZP1P60852 638 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 TMEM92Q6UXU6 159 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 SELENOHQ8IZQ5 122 aaKnown RBP10.71□□□□□ -0.69
CLCN4-203ENST00000421085 LSM10Q969L4 123 aaKnown RBP10.71□□□□□ -0.69
CLCN4-203ENST00000421085 QTRT1Q9BXR0 403 aaKnown RBP10.71□□□□□ -0.69
CLCN4-203ENST00000421085 OR2J1Q9GZK6 312 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 IGKV3-7A0A075B6H7 116 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 LINC00587B1AMM8 73 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 TNFSF14O43557 240 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 TRA2AQ13595 282 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLCN4-203ENST00000421085 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.69
CLCN4-203ENST00000421085 CRYABP02511 175 aaKnown RBP10.71□□□□□ -0.69
CLCN4-203ENST00000421085 SCGB1A1P11684 91 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 C9orf40Q8IXQ3 194 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 CADM4Q8NFZ8 388 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 RND1Q92730 232 aa10.71□□□□□ -0.69
CLCN4-203ENST00000421085 MPDU1O75352 247 aa10.71□□□□□ -0.7
CLCN4-203ENST00000421085 MOSPD3O75425 235 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms