RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 P2RX4Q99571 388 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 SULT4A1Q9BR01 284 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 ZNF251Q9BRH9 671 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 URM1Q9BTM9 101 aaKnown RBP16.77■□□□□ 0.28
PTPN4-202ENST00000420482 FAAP24Q9BTP7 215 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 RIMS4Q9H426 269 aaPredicted RBP16.77■□□□□ 0.28
PTPN4-202ENST00000420482 PLEKHJ1Q9NW61 149 aa16.77■□□□□ 0.28
PTPN4-202ENST00000420482 ZNF107Q9UII5 783 aaPredicted RBP16.77■□□□□ 0.28
PTPN4-202ENST00000420482 CCL24O00175 119 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 SLC22A1O15245 554 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 ARL6IP5O75915 188 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 IGF1P05019 195 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 RPLP1P05386 114 aaKnown RBP16.76■□□□□ 0.27
PTPN4-202ENST00000420482 PSMA1P25786 263 aaKnown RBP16.76■□□□□ 0.27
PTPN4-202ENST00000420482 HOXD3P31249 432 aaPredicted RBP16.76■□□□□ 0.27
PTPN4-202ENST00000420482 RAB25P57735 213 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 GNMTQ14749 295 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 HMGN3Q15651 99 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 FAM27D1Q5T7N8 215 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 IL1F10Q8WWZ1 152 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 TM2D1Q9BX74 207 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 PIPOXQ9P0Z9 390 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 MGAT4AQ9UM21 535 aa16.76■□□□□ 0.27
PTPN4-202ENST00000420482 K7EIL1 84 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 UCHL1P09936 223 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 BLVRBP30043 206 aaPredicted RBP16.75■□□□□ 0.27
PTPN4-202ENST00000420482 ACTBP60709 375 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 LIPKQ5VXJ0 399 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 OR10K2Q6IF99 312 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 FAM71F2Q6NXP2 309 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 TMEM65Q6PI78 240 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 C18orf65Q6ZTR6 163 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 C6orf201Q7Z4U5 140 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 RNF152Q8N8N0 203 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 OR5M8Q8NGP6 311 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 SETD6Q8TBK2 473 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 GHITMQ9H3K2 345 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 PLGRKTQ9HBL7 147 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 KIAA1456Q9P272 454 aa16.75■□□□□ 0.27
PTPN4-202ENST00000420482 LSM2Q9Y333 95 aaKnown RBP16.75■□□□□ 0.27
PTPN4-202ENST00000420482 IGHG4P01861 327 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 SLC2A2P11168 524 aaPredicted RBP16.74■□□□□ 0.27
PTPN4-202ENST00000420482 ARSBP15848 533 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 MYF6P23409 242 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 KRTAP10-11P60412 298 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 KIR2DS1Q14954 304 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 ZNF833PQ6ZTB9 187 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 NABP2Q9BQ15 211 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 HSPB9Q9BQS6 159 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 VCX3BQ9H321 246 aa16.74■□□□□ 0.27
PTPN4-202ENST00000420482 TMEM14DPA8MWL7 114 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 RAB29O14966 203 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 NBR2O15453 112 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 RGS10O43665 173 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 HSMCR30P0CW71 290 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 LCNL1Q6ZST4 164 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 SVOPQ8N4V2 548 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 TMEM203Q969S6 136 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 RAX2Q96IS3 184 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 KCTD7Q96MP8 289 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 MRPL20Q9BYC9 149 aaKnown RBP16.73■□□□□ 0.27
PTPN4-202ENST00000420482 ISYNA1Q9NPH2 558 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 NBEAL2Q6ZNJ1 2754 aa16.73■□□□□ 0.27
PTPN4-202ENST00000420482 COL7A1Q02388 2944 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 SAA2-SAA4A0A096LPE2 208 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 ANKRD65E5RJM6 399 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 RAMP3O60896 148 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 NAPSAO96009 420 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 HLA-DRB1P01911 266 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 SAA2P0DJI9 122 aaPredicted RBP16.72■□□□□ 0.27
PTPN4-202ENST00000420482 AQP4P55087 323 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 DGCR2P98153 550 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 UNC119Q13432 240 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 ODF3L1Q8IXM7 274 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 C4orf3Q8WVX3 66 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 EDARADDQ8WWZ3 215 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 NICN1Q9BSH3 213 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 CCDC90BQ9GZT6 254 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 SLC23A1Q9UHI7 598 aa16.72■□□□□ 0.27
PTPN4-202ENST00000420482 WI2-2373I1.2A0A1W2PRP0 233 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 ERICH4A6NGS2 130 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 SLC17A2O00624 439 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 CD37P11049 281 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 MC5RP33032 325 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 PSMD7P51665 324 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 CFHR3Q02985 330 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 TPBGQ13641 420 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 IRF3Q14653 427 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 LIN54Q6MZP7 749 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 DUX3Q96PT4 197 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 OR51J1Q9H342 316 aa16.71■□□□□ 0.27
PTPN4-202ENST00000420482 HSPA12AO43301 675 aa16.7■□□□□ 0.26
PTPN4-202ENST00000420482 ZBTB25P24278 435 aa16.7■□□□□ 0.26
PTPN4-202ENST00000420482 PSMB8P28062 276 aa16.7■□□□□ 0.26
PTPN4-202ENST00000420482 OR3A3P47888 321 aa16.7■□□□□ 0.26
PTPN4-202ENST00000420482 CD69Q07108 199 aa16.7■□□□□ 0.26
PTPN4-202ENST00000420482 MLLT11Q13015 90 aaPredicted RBP16.7■□□□□ 0.26
PTPN4-202ENST00000420482 RAB11BQ15907 218 aa16.7■□□□□ 0.26
PTPN4-202ENST00000420482 C5orf64Q2M2E5 130 aa16.7■□□□□ 0.26
PTPN4-202ENST00000420482 C9orf66Q5T8R8 295 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms