RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RSPO4Q2I0M5 234 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-205ENST00000418258 SLC22A18ASQ8N1D0 253 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 ZNF519Q8TB69 540 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 RTN4RQ9BZR6 473 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 AKIP1Q9NQ31 210 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 LYRM2Q9NU23 88 aaPredicted RBP9.77□□□□□ -0.85
PTCH1-205ENST00000418258 PITPNC1Q9UKF7 332 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 RNF115Q9Y4L5 304 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 CNOT1A5YKK6 2376 aaKnown RBP9.77□□□□□ -0.85
PTCH1-205ENST00000418258 P2RY1P47900 373 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 TIMP4Q99727 224 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 SOSTQ9BQB4 213 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 LRRC75BQ2VPJ9 315 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 OR10D4PQ8NGN7 298 aa9.77□□□□□ -0.85
PTCH1-205ENST00000418258 CEACAM18A8MTB9 384 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 ISLRO14498 428 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 PDE6DO43924 150 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 PDLIM4P50479 330 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 MGAT2Q10469 447 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 ELOBQ15370 118 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 MRM1Q6IN84 353 aaKnown RBP9.76□□□□□ -0.85
PTCH1-205ENST00000418258 TPRX1Q8N7U7 411 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 PTX4Q96A99 478 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 GUCD1Q96NT3 240 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 GTF3C1Q12789 2109 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 WNK2Q9Y3S1 2297 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 TTRP02766 147 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 BTF3P20290 206 aaKnown RBP9.76□□□□□ -0.85
PTCH1-205ENST00000418258 TMEM255AQ5JRV8 349 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 CALHM1Q8IU99 346 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 FAM24BQ8N5W8 94 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 ZNF488Q96MN9 340 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 UPK3AO75631 287 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 TAS2R60P59551 318 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 KLF9Q13886 244 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-205ENST00000418258 FAM53AQ6NSI3 398 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-205ENST00000418258 LDLRAD3Q86YD5 345 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 ZBTB34Q8NCN2 500 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 OR4B1Q8NGF8 309 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 DUX5Q96PT3 197 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 PAXXQ9BUH6 204 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 CHST5Q9GZS9 411 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 RPL36A-HNRNPH2H7BZ11 118 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 SSX1Q16384 188 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 PILRBQ9UKJ0 227 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 ANKRD20A5PA0PJZ0 165 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 TGIF1Q15583 401 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 HIST3H3Q16695 136 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 LRRC75AQ8NAA5 344 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 BVESQ8NE79 360 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 OR8D4Q8NGM9 314 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 ZNF385DQ9H6B1 395 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 PRSS50Q9UI38 385 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 LTBP4Q8N2S1 1624 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 CDRT15L2A8MXV6 281 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 LEUTXA8MZ59 168 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 RGS13O14921 159 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 ZNF501Q96CX3 271 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-205ENST00000418258 TMEM229AB2RXF0 380 aa9.76□□□□□ -0.85
PTCH1-205ENST00000418258 PEBP1P30086 187 aaKnown RBP9.76□□□□□ -0.85
PTCH1-205ENST00000418258 COL11A2P13942 1736 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-205ENST00000418258 A0A1W2PPV9 198 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 CORTO00230 105 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 ITLN1Q8WWA0 313 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 MIOXQ9UGB7 285 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 IGHV3OR16-10A0A075B7F0 116 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 TMEM50BP56557 158 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 OR2T10Q8NGZ9 312 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 ZNHIT1O43257 154 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 CYB5R3P00387 301 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-205ENST00000418258 HCP5Q6MZN7 132 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 MRPL54Q6P161 138 aaKnown RBP9.75□□□□□ -0.85
PTCH1-205ENST00000418258 UNQ5815/PRO19632Q6UWF5 114 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 ADAD2Q8NCV1 583 aaKnown RBP9.75□□□□□ -0.85
PTCH1-205ENST00000418258 PHF3Q92576 2039 aaKnown RBP9.75□□□□□ -0.85
PTCH1-205ENST00000418258 ABHD14BQ96IU4 210 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 SLC25A33Q9BSK2 321 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 SCN5AQ14524 2016 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 LOC105371242A0A075B767 164 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 ZNF324O75467 553 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-205ENST00000418258 GCGP01275 180 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 SNRPCP09234 159 aaKnown RBP9.75□□□□□ -0.85
PTCH1-205ENST00000418258 PGA4P0DJD7 388 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 PGA5P0DJD9 388 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 CLEC18BQ6UXF7 455 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 MUC15Q8N387 334 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 STPG3Q8N7X2 389 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 OR4C12Q96R67 309 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 GPA33Q99795 319 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 TMEM204Q9BSN7 226 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 TMEM56-RWDD3S4R434 201 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 MPDZO75970 2070 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 COL6A6A6NMZ7 2263 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 DLL1O00548 723 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 HYPMO75409 117 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 APCSP02743 223 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 SULT1A2P50226 295 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 HERPUD1Q15011 391 aa9.75□□□□□ -0.85
PTCH1-205ENST00000418258 CLLU1Q5K131 121 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms