RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 A0A1W2PPE3 182 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 HAND1O96004 215 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 EIF2S3P41091 472 aaKnown RBP9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 FGF8P55075 233 aaPredicted RBP9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 SERF2P84101 59 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 HES3Q5TGS1 186 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 Q6P435 159 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 ZNF880Q6PDB4 577 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 DBX2Q6ZNG2 339 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 SLC35E3Q7Z769 313 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 FGFRL1Q8N441 504 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 GMPPAQ96IJ6 420 aaPredicted RBP9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 ZNF251Q9BRH9 671 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 CELA3BP08861 270 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 OR3A1P47881 315 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 NDUFA6P56556 154 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 SLC38A11Q08AI6 406 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 TESK1Q15569 626 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 DRAM1Q8N682 238 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 ZNF709Q8N972 641 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 WDYHV1Q96HA8 205 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 OR2D2Q9H210 308 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 ZNF665Q9H7R5 613 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 SIRT7Q9NRC8 400 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 TINAGQ9UJW2 476 aa9.91□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 CACNA1DQ01668 2161 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 NPIPB11E5RHQ5 1161 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 CYB5BO43169 146 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 SMPD2O60906 423 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 BCL2P10415 239 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 LHX4Q969G2 390 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 GP6Q9HCN6 339 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 LMO1P25800 156 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 ERVS71-1P61550 626 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 ZNF816Q0VGE8 651 aaPredicted RBP9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 NCMAPQ5T1S8 102 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 MUCL1Q96DR8 90 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 MALSU1Q96EH3 234 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 TRIB1Q96RU8 372 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 WASF3Q9UPY6 502 aa9.9□□□□□ -0.82
CSPG4P3Y-201ENST00000418188 MAP1LC3B2A6NCE7 125 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 B4DEV8 164 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TIMM8AO60220 97 aaPredicted RBP9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 PGA5P0DJD9 388 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 GABRA6Q16445 453 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ATP1A1-AS1Q5TC04 95 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 HEPN1Q6WQI6 88 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 MDS2Q8NDY4 140 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 PSMG3Q9BT73 122 aaPredicted RBP9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 MAP1LC3BQ9GZQ8 125 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TMPRSS5Q9H3S3 457 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 UFSP2Q9NUQ7 469 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 FREM2Q5SZK8 3169 aa9.9□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 A0A087WWC5 75 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 LOC102723971A0A1B0GUV8 181 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 IGKV1-5P01602 117 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 FABP1P07148 127 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 NKX6-1P78426 367 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 PNRC1Q12796 327 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ZNF610Q8N9Z0 462 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 KIAA2026Q5HYC2 2103 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 CXorf65A6NEN9 183 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TMEM210A6NLX4 147 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 CEBPDP49716 269 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ALKBH2Q6NS38 261 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ZNF343Q6P1L6 599 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 C1orf87Q8N0U7 546 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ZNF525Q8N782 197 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 OR4C12Q96R67 309 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 MED13Q9UHV7 2174 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TNRC18O15417 2968 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TRAV1-1A0A0B4J248 108 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 IGKV1-39P01597 117 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 IGKV1D-39P04432 117 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 GCH1P30793 250 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ZNF146Q15072 292 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ODF3L1Q8IXM7 274 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ZBTB34Q8NCN2 500 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 SPRR3Q9UBC9 169 aa9.89□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 A0A1W2PNU3 283 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 FAM90A26D6RGX4 464 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 CD59P13987 128 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 PMP22Q01453 160 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TMEM41BQ5BJD5 291 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 INO80CQ6PI98 192 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 ZNF645Q8N7E2 425 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 RCC1LQ96I51 464 aaKnown RBP9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TOLLIPQ9H0E2 274 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 VAX2Q9UIW0 290 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 OOEPA6NGQ2 149 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 CLDN34H7C241 214 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 SP9P0CG40 484 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 G6PCP35575 357 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 TNFRSF9Q07011 255 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 AESQ08117 197 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 PSG7Q13046 419 aa9.88□□□□□ -0.83
CSPG4P3Y-201ENST00000418188 LRRC75BQ2VPJ9 315 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms