RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 YPEL2Q96QA6 119 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 ABHD14AQ9BUJ0 271 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 SSR3Q9UNL2 185 aa12.16□□□□□ -0.46
NUP50-204ENST00000417702 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
NUP50-204ENST00000417702 A0A0A6YYD4 124 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 PSMB11A5LHX3 300 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 ADARB2-AS1A8MUL3 147 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 SERPINE3A8MV23 424 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 SOCS1O15524 211 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 LANCL1O43813 399 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 NAPSAO96009 420 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 FGF9P31371 208 aaPredicted RBP12.15□□□□□ -0.46
NUP50-204ENST00000417702 CLDN12P56749 244 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 GNMTQ14749 295 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 PDLIM3Q53GG5 364 aaPredicted RBP12.15□□□□□ -0.46
NUP50-204ENST00000417702 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 C22orf42Q6IC83 251 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 FAM89BQ8N5H3 189 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 CHPT1Q8WUD6 406 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 IL1F10Q8WWZ1 152 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 STEAP1Q9UHE8 339 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.46
NUP50-204ENST00000417702 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 PF4V1P10720 104 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 CD36P16671 472 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 VEGFCP49767 419 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 C2orf76Q3KRA6 126 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 TCTEX1D4Q5JR98 221 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 LY6G6FQ5SQ64 297 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 HES5Q5TA89 166 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 C5orf24Q7Z6I8 188 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 SLC35E3Q7Z769 313 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 Q8N6K4 173 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 OR8H1Q8NGG4 311 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 OR56B1Q8NGI3 324 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 LIN7CQ9NUP9 197 aaKnown RBP12.14□□□□□ -0.47
NUP50-204ENST00000417702 TXNL4BQ9NX01 149 aaKnown RBP12.14□□□□□ -0.47
NUP50-204ENST00000417702 AK3Q9UIJ7 227 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 HSF4Q9ULV5 492 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 MGAT4AQ9UM21 535 aa12.14□□□□□ -0.47
NUP50-204ENST00000417702 TRBV6-6A0A0A6YYG2 114 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
NUP50-204ENST00000417702 IGHG2P01859 326 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 RAB3BP20337 219 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 SLC35B1P78383 322 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 ZNF880Q6PDB4 577 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 C10orf99Q6UWK7 81 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 ZNF329Q86UD4 541 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 OR51E2Q9H255 320 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 RAB22AQ9UL26 194 aa12.13□□□□□ -0.47
NUP50-204ENST00000417702 TRIM64CA6NLI5 447 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 MRPS15P82914 257 aaKnown RBP12.12□□□□□ -0.47
NUP50-204ENST00000417702 LSAMPQ13449 338 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 TIMM50Q3ZCQ8 353 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 Q8N9W7 124 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 ARHGAP5-AS1Q96IT6 56 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 KCTD7Q96MP8 289 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
NUP50-204ENST00000417702 S1PR3Q99500 378 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 CMSS1Q9BQ75 279 aaKnown RBP12.12□□□□□ -0.47
NUP50-204ENST00000417702 CHCHD6Q9BRQ6 235 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 HDHD3Q9BSH5 251 aaPredicted RBP12.12□□□□□ -0.47
NUP50-204ENST00000417702 ABCG5Q9H222 651 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 C12orf4Q9NQ89 552 aa12.12□□□□□ -0.47
NUP50-204ENST00000417702 LOC100506127A0A0U1RQW1 187 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 TMEM272A0A1B0GTI8 110 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 SHISA3A0PJX4 238 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 FOXI3A8MTJ6 420 aaPredicted RBP12.11□□□□□ -0.47
NUP50-204ENST00000417702 G3V4G9 280 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 AP4M1O00189 453 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 LDLRAD4O15165 306 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 HSPA12AO43301 675 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 PF4P02776 101 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 GADD45AP24522 165 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 GPR12P47775 334 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 TMEM50BP56557 158 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 OR10A3P58181 314 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 SAMD5Q5TGI4 173 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 TPRA1Q86W33 373 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 STPG2Q8N412 459 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 GON7Q9BXV9 100 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 PECRQ9BY49 303 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 MRPL20Q9BYC9 149 aaKnown RBP12.11□□□□□ -0.47
NUP50-204ENST00000417702 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
NUP50-204ENST00000417702 SAA2-SAA4A0A096LPE2 208 aa12.1□□□□□ -0.47
NUP50-204ENST00000417702 IFITM5A6NNB3 132 aa12.1□□□□□ -0.47
NUP50-204ENST00000417702 RAB29O14966 203 aa12.1□□□□□ -0.47
NUP50-204ENST00000417702 ST8SIA5O15466 376 aa12.1□□□□□ -0.47
NUP50-204ENST00000417702 SAA2P0DJI9 122 aaPredicted RBP12.1□□□□□ -0.47
NUP50-204ENST00000417702 CD33P20138 364 aa12.1□□□□□ -0.47
NUP50-204ENST00000417702 ZBTB25P24278 435 aa12.1□□□□□ -0.47
NUP50-204ENST00000417702 OR3A3P47888 321 aa12.1□□□□□ -0.47
NUP50-204ENST00000417702 F2RL1P55085 397 aa12.1□□□□□ -0.47
NUP50-204ENST00000417702 HLA-DRB3P79483 266 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms