RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GRNP28799 593 aaKnown RBP13.98□□□□□ -0.17
SSBP3-205ENST00000417664 EDDM3BP56851 147 aa13.98□□□□□ -0.17
SSBP3-205ENST00000417664 TFF3Q07654 80 aa13.98□□□□□ -0.17
SSBP3-205ENST00000417664 MST1LQ2TV78 715 aa13.98□□□□□ -0.17
SSBP3-205ENST00000417664 NMSQ5H8A3 153 aa13.98□□□□□ -0.17
SSBP3-205ENST00000417664 OR52L2PQ8NGH6 319 aa13.98□□□□□ -0.17
SSBP3-205ENST00000417664 OR4D5Q8NGN0 318 aa13.98□□□□□ -0.17
SSBP3-205ENST00000417664 TMEM204Q9BSN7 226 aa13.98□□□□□ -0.17
SSBP3-205ENST00000417664 NSG2Q9Y328 171 aa13.98□□□□□ -0.17
SSBP3-205ENST00000417664 CACNA1DQ01668 2161 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 PPIAL4EA0A075B759 164 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 PPIAL4DF5H284 164 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 ITGB1BP1O14713 200 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 TAAR5O14804 337 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 YPEL1O60688 119 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 MBPP02686 304 aaPredicted RBP13.97□□□□□ -0.17
SSBP3-205ENST00000417664 PPIAL4FP0DN26 164 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 CGB3P0DN86 165 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 CGB7P0DN87 165 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 SWI5Q1ZZU3 235 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 ZNF672Q499Z4 452 aaPredicted RBP13.97□□□□□ -0.17
SSBP3-205ENST00000417664 C4orf17Q53FE4 359 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 THOC7Q6I9Y2 204 aaKnown RBP13.97□□□□□ -0.17
SSBP3-205ENST00000417664 GALNT11Q8NCW6 608 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 OR51H1Q8NH63 302 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 YPEL2Q96QA6 119 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 PARP12Q9H0J9 701 aaKnown RBP13.97□□□□□ -0.17
SSBP3-205ENST00000417664 TMEM106BQ9NUM4 274 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 PPIAL4AQ9Y536 164 aa13.97□□□□□ -0.17
SSBP3-205ENST00000417664 TRGV10A0A0A0MS01 117 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 GYPAP02724 150 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 PPP1CCP36873 323 aaKnown RBP13.96□□□□□ -0.17
SSBP3-205ENST00000417664 CATR1Q13166 79 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 ST8SIA2Q92186 375 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 CORO2AQ92828 525 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 NEUROG1Q92886 237 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 LSM10Q969L4 123 aaKnown RBP13.96□□□□□ -0.17
SSBP3-205ENST00000417664 RRNAD1Q96FB5 475 aaKnown RBP13.96□□□□□ -0.17
SSBP3-205ENST00000417664 FAM210AQ96ND0 272 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 OR2D2Q9H210 308 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 POMT1Q9Y6A1 747 aa13.96□□□□□ -0.17
SSBP3-205ENST00000417664 F5H0A9 414 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-205ENST00000417664 K7EPK0 472 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 SNTB1Q13884 538 aaKnown RBP13.95□□□□□ -0.18
SSBP3-205ENST00000417664 GNMTQ14749 295 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 CDSNQ15517 529 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 ZNF66Q6ZN08 573 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 ZCCHC24Q8N2G6 241 aaKnown RBP13.95□□□□□ -0.18
SSBP3-205ENST00000417664 MUC15Q8N387 334 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 FAM71E2Q8N5Q1 922 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 DEFB108BQ8NET1 73 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 OR52M1Q8NGK5 317 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 STOML3Q8TAV4 291 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 CCL13Q99616 98 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 ZNF471Q9BX82 626 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-205ENST00000417664 LINC00574Q9H8X3 128 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 CALYQ9NYX4 217 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 LSM5Q9Y4Y9 91 aaKnown RBP13.95□□□□□ -0.18
SSBP3-205ENST00000417664 DSCAMO60469 2012 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 KBTBD11-OT1A0A1B0GTJ5 212 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 A0A1B0GU03 582 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 LINC00862A6NCI5 91 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 DEFB108AA8MXU0 73 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 SIAH2O43255 324 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 NDUFA2O43678 99 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 FSTL3O95633 263 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 SCGB1D2O95969 90 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-205ENST00000417664 EIF5AP63241 154 aaKnown RBP13.95□□□□□ -0.18
SSBP3-205ENST00000417664 EIF4EBP1Q13541 118 aaPredicted RBP13.95□□□□□ -0.18
SSBP3-205ENST00000417664 MORN2Q502X0 79 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 GPR157Q5UAW9 335 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 RFESDQ8TAC1 157 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 GPHA2Q96T91 129 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 AGMATQ9BSE5 352 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 DCTN5Q9BTE1 182 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 GNG12Q9UBI6 72 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 CLN8Q9UBY8 286 aa13.95□□□□□ -0.18
SSBP3-205ENST00000417664 RPS10-NUDT3A0A1W2PQS6 291 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 ZNF729A6NN14 1252 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-205ENST00000417664 ADAM20O43506 726 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 ATG12O94817 140 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 SPDEFO95238 335 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 PLAUP00749 431 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 HKR1P10072 659 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 LOXP28300 417 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-205ENST00000417664 RPL12P30050 165 aaKnown RBP13.94□□□□□ -0.18
SSBP3-205ENST00000417664 P2RY1P47900 373 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 LOXL3P58215 753 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 MEF2CQ06413 473 aaPredicted RBP13.94□□□□□ -0.18
SSBP3-205ENST00000417664 FOXRED2Q8IWF2 684 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 CCL17Q92583 94 aa13.94□□□□□ -0.18
SSBP3-205ENST00000417664 HSD17B10Q99714 261 aaKnown RBP13.94□□□□□ -0.18
SSBP3-205ENST00000417664 ANKHD1Q8IWZ3 2542 aaKnown RBP13.94□□□□□ -0.18
SSBP3-205ENST00000417664 IGHV1-69-2A0A0G2JMI3 117 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 hADV38S2A0JD32 116 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 TMPRSS2O15393 492 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 CLDN14O95500 239 aa13.93□□□□□ -0.18
SSBP3-205ENST00000417664 TPT1P13693 172 aaKnown RBP13.93□□□□□ -0.18
SSBP3-205ENST00000417664 MMP9P14780 707 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms