RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 CT45A3Q8NHU0 189 aa10.04□□□□□ -0.8
SKA1-203ENST00000417656 GCDHQ92947 438 aaPredicted RBP10.04□□□□□ -0.8
SKA1-203ENST00000417656 OCSTAMPQ9BR26 566 aa10.04□□□□□ -0.8
SKA1-203ENST00000417656 ABCG5Q9H222 651 aa10.04□□□□□ -0.8
SKA1-203ENST00000417656 C1RLQ9NZP8 487 aa10.04□□□□□ -0.8
SKA1-203ENST00000417656 SLC23A1Q9UHI7 598 aa10.04□□□□□ -0.8
SKA1-203ENST00000417656 COL6A5A8TX70 2615 aa10.04□□□□□ -0.8
SKA1-203ENST00000417656 DNHD1Q96M86 4753 aa10.04□□□□□ -0.8
SKA1-203ENST00000417656 IGKV1D-8A0A087WSZ0 117 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 TMEM89A2RUT3 159 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 A6NDX4 124 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 H3BMQ9 156 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 TIMM23O14925 209 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 ST8SIA5O15466 376 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 SSX5O60225 188 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 YPEL1O60688 119 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 RGS11O94810 467 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 CRYBA1P05813 215 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 PTHLHP12272 177 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 DTYMKP23919 212 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 CD24P25063 80 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 KIR2DS4P43632 304 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 ARHGDIBP52566 201 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 RELBQ01201 579 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 KIR2DS1Q14954 304 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 PNLIPRP3Q17RR3 467 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 CCDC144NLQ6NUI1 221 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 LYG1Q8N1E2 194 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 OR4A4PQ8NGN8 299 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 OR56B4Q8NH76 319 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 ACOT12Q8WYK0 555 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 ISOC1Q96CN7 298 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 BCL7BQ9BQE9 202 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 CABLES2Q9BTV7 478 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 IFI27L2Q9H2X8 130 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 AUNIPQ9H7T9 357 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 DIABLOQ9NR28 239 aa10.03□□□□□ -0.8
SKA1-203ENST00000417656 HSPA12AO43301 675 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 HPGDSO60760 199 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 GSTT2P0CG29 244 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 GSTT2BP0CG30 244 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 ZNF182P17025 639 aaPredicted RBP10.02□□□□□ -0.81
SKA1-203ENST00000417656 BRS3P32247 399 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 MNDAP41218 407 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 RAB7AP51149 207 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 ZNF137PP52743 207 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 RAG2P55895 527 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 TAS2R20P59543 309 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 RPL15P61313 204 aaKnown RBP10.02□□□□□ -0.81
SKA1-203ENST00000417656 PITPNAQ00169 270 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 ZNF816Q0VGE8 651 aaPredicted RBP10.02□□□□□ -0.81
SKA1-203ENST00000417656 IGSF11Q5DX21 431 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 TMEM69Q5SWH9 247 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 CCBE1Q6UXH8 406 aaPredicted RBP10.02□□□□□ -0.81
SKA1-203ENST00000417656 OR8H3Q8N146 312 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 DRAM1Q8N682 238 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 OR2AK2Q8NG84 335 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 CFHR4Q92496 578 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 AP3S1Q92572 193 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 ST6GALNAC6Q969X2 333 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 S100A16Q96FQ6 103 aaKnown RBP10.02□□□□□ -0.81
SKA1-203ENST00000417656 CEPT1Q9Y6K0 416 aa10.02□□□□□ -0.81
SKA1-203ENST00000417656 IGHV3-72A0A0B4J1Y9 119 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 IGHV1-3A0A0C4DH29 117 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 BET1O15155 118 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 XRCC3O43542 346 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 NDUFA7O95182 113 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 APOA1P02647 267 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 MDKP21741 143 aaPredicted RBP10.01□□□□□ -0.81
SKA1-203ENST00000417656 ZBTB25P24278 435 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 CEACAM6P40199 344 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 AWAT1Q58HT5 328 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 LY6G6FQ5SQ64 297 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 MZT2AQ6P582 158 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 Q6ZS49 121 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 MOB3BQ86TA1 216 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 ODF3L1Q8IXM7 274 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 DYNC2LI1Q8TCX1 351 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 CAPSLQ8WWF8 208 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 RTN4IP1Q8WWV3 396 aaPredicted RBP10.01□□□□□ -0.81
SKA1-203ENST00000417656 ST6GALNAC5Q9BVH7 336 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 RAB18Q9NP72 206 aa10.01□□□□□ -0.81
SKA1-203ENST00000417656 CCDC59Q9P031 241 aaKnown RBP10.01□□□□□ -0.81
SKA1-203ENST00000417656 SAA2-SAA4A0A096LPE2 208 aa10□□□□□ -0.81
SKA1-203ENST00000417656 MEIS3P1A6NDR6 274 aa10□□□□□ -0.81
SKA1-203ENST00000417656 CCDC160A6NGH7 325 aa10□□□□□ -0.81
SKA1-203ENST00000417656 GAPDHP04406 335 aaKnown RBP10□□□□□ -0.81
SKA1-203ENST00000417656 FCER2P06734 321 aa10□□□□□ -0.81
SKA1-203ENST00000417656 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
SKA1-203ENST00000417656 SAA2P0DJI9 122 aaPredicted RBP10□□□□□ -0.81
SKA1-203ENST00000417656 ELK1P19419 428 aa10□□□□□ -0.81
SKA1-203ENST00000417656 SOX6P35712 828 aa10□□□□□ -0.81
SKA1-203ENST00000417656 OR3A3P47888 321 aa10□□□□□ -0.81
SKA1-203ENST00000417656 FOXL1Q12952 345 aa10□□□□□ -0.81
SKA1-203ENST00000417656 SRSF7Q16629 238 aaKnown RBP eCLIP10□□□□□ -0.81
SKA1-203ENST00000417656 LCE2AQ5TA79 106 aaPredicted RBP10□□□□□ -0.81
SKA1-203ENST00000417656 C12orf54Q6X4T0 127 aa10□□□□□ -0.81
SKA1-203ENST00000417656 Q6ZSV7 163 aa10□□□□□ -0.81
SKA1-203ENST00000417656 TGIF2LXQ8IUE1 241 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms