RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.44□□□□□ -0.1
SEMA3B-201ENST00000416295 RHBDL2Q9NX52 303 aa14.44□□□□□ -0.1
SEMA3B-201ENST00000416295 OR2F2O95006 317 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 ZNF134P52741 427 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 ARFRP1Q13795 201 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 KIR2DS1Q14954 304 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 C5orf24Q7Z6I8 188 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 OR2AK2Q8NG84 335 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 RTN4IP1Q8WWV3 396 aaPredicted RBP14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 CFHR4Q92496 578 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 PHF21AQ96BD5 680 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 SLC25A33Q9BSK2 321 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 PRSS22Q9GZN4 317 aa14.43□□□□□ -0.1
SEMA3B-201ENST00000416295 IGHV1-3A0A0C4DH29 117 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 FAM90A9PA6NNJ1 464 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 TRDCB7Z8K6 153 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 HSPA12AO43301 675 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 FCGR3AP08637 254 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 ZBTB25P24278 435 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 TGFBR1P36897 503 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 TALDO1P37837 337 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 RPS19P39019 145 aaKnown RBP14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 REG1BP48304 166 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 PROK1P58294 105 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 HABP2Q14520 560 aaPredicted RBP14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 MOB3BQ86TA1 216 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 TGIF2LXQ8IUE1 241 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 LYG1Q8N1E2 194 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 RBM14Q96PK6 669 aaKnown RBP14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 SLC23A1Q9UHI7 598 aa14.42□□□□□ -0.1
SEMA3B-201ENST00000416295 A0A0A6YYH2 397 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 A6NJ64 397 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 M0QZK8 103 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 LANCL1O43813 399 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 SNRNP70P08621 437 aaKnown RBP14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 GSTP1P09211 210 aaKnown RBP14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 SCTP09683 121 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 HES1Q14469 280 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 CDNFQ49AH0 187 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 Q8N2B8 174 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 OR4A4PQ8NGN8 299 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 OR5H6Q8NGV6 325 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 EDARADDQ8WWZ3 215 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 SLC25A38Q96DW6 304 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 ZNF702PQ9H963 129 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 SPATA2Q9UM82 520 aa14.41□□□□□ -0.1
SEMA3B-201ENST00000416295 ITGB1BP1O14713 200 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 FABP7O15540 132 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 TMEM11P17152 192 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 DTYMKP23919 212 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 SERPINB10P48595 397 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 VBP1P61758 197 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 NCS1P62166 190 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 PITPNAQ00169 270 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 SRSF7Q16629 238 aaKnown RBP eCLIP14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 HACD4Q5VWC8 232 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 ANKRD13BQ86YJ7 626 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 IZUMO1Q8IYV9 350 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 SLC25A46Q96AG3 418 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 MOB4Q9Y3A3 225 aa14.4□□□□□ -0.1
SEMA3B-201ENST00000416295 GABARAPO95166 117 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 DIRAS3O95661 229 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 IGKV1D-33P01593 117 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 IGKV1-33P01594 117 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 CD1BP29016 333 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 CEACAM6P40199 344 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 PNLIPRP3Q17RR3 467 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 ARSJQ5FYB0 599 aaPredicted RBP14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 Q6ZS49 121 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 GPR141Q7Z602 305 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 KCTD12Q96CX2 325 aaKnown RBP14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 IFI27L2Q9H2X8 130 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 GHITMQ9H3K2 345 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 DIABLOQ9NR28 239 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 PIPOXQ9P0Z9 390 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 OR1A1Q9P1Q5 309 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 SIGLEC9Q9Y336 463 aa14.39□□□□□ -0.11
SEMA3B-201ENST00000416295 MGAM2Q2M2H8 2515 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 TMEM235A6NFC5 223 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 RAB29O14966 203 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 ST8SIA5O15466 376 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 TFAP2AP05549 437 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 ALDH3B2P48448 385 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 GNG2P59768 71 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 BLCAPP62952 87 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 EBI3Q14213 229 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 ZNF260Q3ZCT1 412 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 FBLN7Q53RD9 439 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 FAM71F2Q6NXP2 309 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 ZNF833PQ6ZTB9 187 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 ODF3L1Q8IXM7 274 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 OR2T10Q8NGZ9 312 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 CITED1Q99966 193 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 CABLES2Q9BTV7 478 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 DCSTAMPQ9H295 470 aa14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 ZNF230Q9UIE0 474 aaPredicted RBP14.38□□□□□ -0.11
SEMA3B-201ENST00000416295 SAA2-SAA4A0A096LPE2 208 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 IGHV3-72A0A0B4J1Y9 119 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 IGKV1-6A0A0C4DH72 117 aa14.37□□□□□ -0.11
SEMA3B-201ENST00000416295 SAA2P0DJI9 122 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms