RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 TNFRSF14Q92956 283 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 SCGB3A2Q96PL1 93 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 AGMATQ9BSE5 352 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
SF3B1-204ENST00000414963 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 NUBP2Q9Y5Y2 271 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 MED13LQ71F56 2210 aa11.66□□□□□ -0.54
SF3B1-204ENST00000414963 CREBBPQ92793 2442 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 IGKV1D-13A0A0B4J2D9 117 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 IGHV4-31P0DP07 118 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 IGKV1-13P0DP09 117 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 SPNP16150 400 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 RAB7AP51149 207 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 ZNF134P52741 427 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 RAG2P55895 527 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 CT45A1Q5HYN5 189 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 UTF1Q5T230 341 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 METTL11BQ5VVY1 283 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 CCBE1Q6UXH8 406 aaPredicted RBP11.65□□□□□ -0.54
SF3B1-204ENST00000414963 SLC25A48Q6ZT89 311 aaKnown RBP11.65□□□□□ -0.54
SF3B1-204ENST00000414963 LDLRAD3Q86YD5 345 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 CT45A3Q8NHU0 189 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 ZFAND1Q8TCF1 268 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 TMEM186Q96B77 213 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 MSI2Q96DH6 328 aaKnown RBP11.65□□□□□ -0.54
SF3B1-204ENST00000414963 MARVELD1Q9BSK0 173 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 RSRP1Q9BUV0 290 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 SUCNR1Q9BXA5 334 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 FXYD6Q9H0Q3 95 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 GHITMQ9H3K2 345 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 HEXA-AS1Q9H8Q6 139 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 LPAR2Q9HBW0 351 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 PSG11Q9UQ72 335 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 GAB2Q9UQC2 676 aa11.65□□□□□ -0.54
SF3B1-204ENST00000414963 ITPR3Q14573 2671 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 ABCA2Q9BZC7 2435 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 SLC22A5O76082 557 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 OR8U9P0C7N5 309 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 GNRHRP30968 328 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 MECP2P51608 486 aaKnown RBP11.64□□□□□ -0.55
SF3B1-204ENST00000414963 TRIM16LQ309B1 348 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 PLET1Q6UQ28 207 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 GLCCI1Q86VQ1 547 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 SLC38A6Q8IZM9 456 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 ABHD12Q8N2K0 398 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 OR2AK2Q8NG84 335 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 OR8U1Q8NH10 309 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 OR9G1Q8NH87 305 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 MARCH1Q8TCQ1 289 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 CREB3L1Q96BA8 519 aa11.64□□□□□ -0.55
SF3B1-204ENST00000414963 ZNF486Q96H40 463 aaPredicted RBP11.64□□□□□ -0.55
SF3B1-204ENST00000414963 IGHV2-26A0A0B4J1V2 119 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 J3QLI3 93 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 J3QR06 171 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 TOX4O94842 621 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 CTSDP07339 412 aaPredicted RBP11.63□□□□□ -0.55
SF3B1-204ENST00000414963 FXYD4P59646 89 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 DCAF12L2Q5VW00 463 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 NCR3LG1Q68D85 454 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 CYB5R2Q6BCY4 276 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 HCP5Q6MZN7 132 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 CENPSQ8N2Z9 138 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 ZBTB34Q8NCN2 500 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 MAPK1IP1LQ8NDC0 245 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 BEND2Q8NDZ0 799 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 BVESQ8NE79 360 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 OR13D1Q8NGV5 346 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 LEAP2Q969E1 77 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 AKR1E2Q96JD6 320 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 TBX15Q96SF7 602 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 RTBDNQ9BSG5 229 aaPredicted RBP11.63□□□□□ -0.55
SF3B1-204ENST00000414963 ABHD14AQ9BUJ0 271 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 CLEC7AQ9BXN2 247 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 SLC5A7Q9GZV3 580 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 ALX4Q9H161 411 aaPredicted RBP11.63□□□□□ -0.55
SF3B1-204ENST00000414963 C20orf85Q9H1P6 137 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 C5orf66Q9H5L9 145 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 HIF1ANQ9NWT6 349 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 VSIG4Q9Y279 399 aa11.63□□□□□ -0.55
SF3B1-204ENST00000414963 SLC31A2O15432 143 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 IGLV1-47P01700 117 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 IGLV2-14P01704 120 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 H2AFB2P0C5Z0 115 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 PGAM2P15259 253 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 PRRX1P54821 245 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 VMO1Q7Z5L0 202 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 CIARTQ8N365 385 aaPredicted RBP11.62□□□□□ -0.55
SF3B1-204ENST00000414963 ZNF645Q8N7E2 425 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.62□□□□□ -0.55
SF3B1-204ENST00000414963 SECTM1Q8WVN6 248 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 TOMM40LQ969M1 308 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 UPRTQ96BW1 309 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 MMP28Q9H239 520 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 NUDT15Q9NV35 164 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 FLVCR2Q9UPI3 526 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 ARHGAP32A7KAX9 2087 aa11.62□□□□□ -0.55
SF3B1-204ENST00000414963 GPR31O00270 319 aa11.61□□□□□ -0.55
SF3B1-204ENST00000414963 TOR1AO14656 332 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms