RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CPNE2Q96FN4 548 aaPredicted RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 COQ2Q96H96 371 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 ZNF714Q96N38 554 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 S100A13Q99584 98 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 MGLLQ99685 303 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 FAM234AQ9H0X4 552 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 METTL9Q9H1A3 318 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 BANF2Q9H503 90 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 Q9H521 79 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 METTL8Q9H825 291 aaKnown RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 CHMP1AQ9HD42 196 aaPredicted RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 ACOT13Q9NPJ3 140 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 GLS2Q9UI32 602 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 KIF25Q9UIL4 384 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 BLOC1S6Q9UL45 172 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 ST3GAL6Q9Y274 331 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 AK6Q9Y3D8 172 aaKnown RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 POMT1Q9Y6A1 747 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 MEIKINA0A087WXM9 373 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 TRAV34A0A0B4J273 112 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 A0A0B4J293 547 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 hADV38S2A0JD32 116 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 ODAMA1E959 279 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 GAGE12JA6NER3 117 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 C17orf98A8MV24 154 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 GPX5O75715 221 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 CRTAPO75718 401 aaPredicted RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 CLPXO76031 633 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 OR7C1O76099 320 aaPredicted RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 PAHP00439 452 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 IGHV3-7P01780 117 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 ARG1P05089 322 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 IGHV1-8P0DP01 117 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 MGMTP16455 207 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 PRTN3P24158 256 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 MAPK3P27361 379 aaPredicted RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 CALRP27797 417 aaKnown RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 PSMB9P28065 219 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 GLP1RP43220 463 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 UBE2E1P51965 193 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 CLDN12P56749 244 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 RBM11P57052 281 aaKnown RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 GABARAPL2P60520 117 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 EMX1Q04741 257 aaPredicted RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 DYNC1I2Q13409 638 aaKnown RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 GPR50Q13585 617 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 TPBGQ13641 420 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 P2RY14Q15391 338 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 NEDD8Q15843 81 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 NCR3LG1Q68D85 454 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 ELP2Q6IA86 826 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 FAM53AQ6NSI3 398 aaPredicted RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 UNQ9370/PRO34162Q6UXP9 181 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 ASCL4Q6XD76 172 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 C9orf139Q6ZV77 190 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 USP43Q70EL4 1123 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 ZNF367Q7RTV3 350 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 C5orf24Q7Z6I8 188 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 DYNAPQ8N1N2 210 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 MS4A15Q8N5U1 240 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 SUMF2Q8NBJ7 301 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 OR51T1Q8NGJ9 327 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 OR5D13Q8NGL4 314 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 OR13A1Q8NGR1 328 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 MRGPRDQ8TDS7 321 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 FAM216AQ8WUB2 273 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 LEAP2Q969E1 77 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 GFI1Q99684 422 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 QTRT1Q9BXR0 403 aaKnown RBP3.94□□□□□ -1.78
VPS41-205ENST00000414632 CHIAQ9BZP6 476 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 SELENOIQ9C0D9 397 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 OR6C3Q9NZP0 311 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 ZNRD1Q9P1U0 126 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 FOXJ3Q9UPW0 622 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 PKD1L1Q8TDX9 2849 aa3.94□□□□□ -1.78
VPS41-205ENST00000414632 TRGV10A0A0A0MS01 117 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 IGHV3-43A0A0B4J1X8 118 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 A0A1W2PPE3 182 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 A0A1W2PRV1 198 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 H3BUX3 64 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 SC5DO75845 299 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 FBP1P09467 338 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 UCHL1P09936 223 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 IGHV3-43DP0DP04 118 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 VPREB1P12018 145 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 GTF2F2P13984 249 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 SRMP19623 302 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 MDKP21741 143 aaPredicted RBP3.93□□□□□ -1.78
VPS41-205ENST00000414632 CDK2P24941 298 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 NFYBP25208 207 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 LMO1P25800 156 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 HTR2CP28335 458 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 SSTR5P35346 364 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 GNG10P50151 68 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 RAB13P51153 203 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 ELLP55199 621 aaPredicted RBP3.93□□□□□ -1.78
VPS41-205ENST00000414632 OR10A3P58181 314 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 MEF2CQ06413 473 aaPredicted RBP3.93□□□□□ -1.78
VPS41-205ENST00000414632 PLA2G7Q13093 441 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 RBM39Q14498 530 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms