RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 MMP23AO75900 390 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 CCNKO75909 580 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 RGS11O94810 467 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 IGHV2-5P01817 119 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 OR8U9P0C7N5 309 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 CXCL3P19876 107 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 ATP5J2P56134 94 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 DLX6P56179 175 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 KRTAP10-9P60411 292 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 GNB2P62879 340 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 CD83Q01151 205 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 SLC9A3R2Q15599 337 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 MSMO1Q15800 293 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 TUSC1Q2TAM9 212 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 ANKRD55Q3KP44 614 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 MORN2Q502X0 79 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 UTF1Q5T230 341 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 HEPN1Q6WQI6 88 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 TBC1D26Q86UD7 250 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 SGPP2Q8IWX5 399 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 CMTM1Q8IZ96 169 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 C12orf45Q8N5I9 185 aaPredicted RBP5.47□□□□□ -1.53
VPS41-204ENST00000413141 ZNF645Q8N7E2 425 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 ZNF439Q8NDP4 499 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 OR2AK2Q8NG84 335 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 OR10A7Q8NGE5 316 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 OR52M1Q8NGK5 317 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 OR8U1Q8NH10 309 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 C8orf46Q8TAG6 207 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 C10orf105Q8TEF2 133 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 CASTOR1Q8WTX7 329 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 EDARADDQ8WWZ3 215 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 FAM168AQ92567 244 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 GALNT14Q96FL9 552 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 PERPQ96FX8 193 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 C5orf30Q96GV9 206 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 AKR1E2Q96JD6 320 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 ST6GAL2Q96JF0 529 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 YPEL2Q96QA6 119 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 PHB2Q99623 299 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 AGMATQ9BSE5 352 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 PIMREGQ9BSJ6 248 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 ABHD14AQ9BUJ0 271 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 SSBP3Q9BWW4 388 aaPredicted RBP5.47□□□□□ -1.53
VPS41-204ENST00000413141 GSX2Q9BZM3 304 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 IFI27L2Q9H2X8 130 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 PRR13Q9NZ81 148 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 MGAT4CQ9UBM8 478 aa5.47□□□□□ -1.53
VPS41-204ENST00000413141 RPUSD1Q9UJJ7 312 aaKnown RBP5.47□□□□□ -1.53
VPS41-204ENST00000413141 RBM7Q9Y580 266 aaKnown RBP5.47□□□□□ -1.53
VPS41-204ENST00000413141 A0A0B4J2A0 478 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 A0A1W2PPH5 198 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 DBX1A6NMT0 343 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 C17orf98A8MV24 154 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 KIAA1324LA8MWY0 1029 aaPredicted RBP5.46□□□□□ -1.54
VPS41-204ENST00000413141 A8MXK9 166 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 VWC2LB2RUY7 222 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 BOLA2-SMG1P6H3BVE0 249 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 NDUFS8O00217 210 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 GOSR2O14653 212 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 ITGB1BP1O14713 200 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 SLC31A2O15432 143 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 MPPED1O15442 326 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 PHF1O43189 567 aaPredicted RBP5.46□□□□□ -1.54
VPS41-204ENST00000413141 TNFSF12O43508 249 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 PGLYRP1O75594 196 aaPredicted RBP5.46□□□□□ -1.54
VPS41-204ENST00000413141 IFNA2P01563 188 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 RBP4P02753 201 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 OR5AC1P0C628 307 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 ANXA3P12429 323 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 NFYBP25208 207 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 S100GP29377 79 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 RAB7AP51149 207 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 ZNF134P52741 427 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 EIF4EBP1Q13541 118 aaPredicted RBP5.46□□□□□ -1.54
VPS41-204ENST00000413141 C2orf68Q2NKX9 166 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 C11orf91Q3C1V1 193 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 Q3ZCU0 254 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 ESCO2Q56NI9 601 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 LY6G6FQ5SQ64 297 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 LIN54Q6MZP7 749 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 C11orf88Q6PI97 169 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 CLEC2AQ6UVW9 174 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 TCTE3Q8IZS6 198 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 DRAM1Q8N682 238 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 LY6G5BQ8NDX9 201 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 OR5M8Q8NGP6 311 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 CLDND2Q8NHS1 167 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 COQ8AQ8NI60 647 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 LEAP2Q969E1 77 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 PPP1R14BQ96C90 147 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 RAB39BQ96DA2 213 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 FYTTD1Q96QD9 318 aaKnown RBP5.46□□□□□ -1.54
VPS41-204ENST00000413141 TP53RKQ96S44 253 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 GPHA2Q96T91 129 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 SUCNR1Q9BXA5 334 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 ZNF436Q9C0F3 470 aaPredicted RBP5.46□□□□□ -1.54
VPS41-204ENST00000413141 RANGRFQ9HD47 186 aaPredicted RBP5.46□□□□□ -1.54
VPS41-204ENST00000413141 SHPKQ9UHJ6 478 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 PSG11Q9UQ72 335 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms