RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 C16orf82Q7Z2V1 217 aa13.05□□□□□ -0.32
NOD1-202ENST00000411552 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
NOD1-202ENST00000411552 THNSL2Q86YJ6 484 aa13.05□□□□□ -0.32
NOD1-202ENST00000411552 Q8N2B8 174 aa13.05□□□□□ -0.32
NOD1-202ENST00000411552 RTN4IP1Q8WWV3 396 aaPredicted RBP13.05□□□□□ -0.32
NOD1-202ENST00000411552 RBM14Q96PK6 669 aaKnown RBP13.05□□□□□ -0.32
NOD1-202ENST00000411552 ABHD14AQ9BUJ0 271 aa13.05□□□□□ -0.32
NOD1-202ENST00000411552 FUNDC2Q9BWH2 189 aa13.05□□□□□ -0.32
NOD1-202ENST00000411552 PKD1L1Q8TDX9 2849 aa13.05□□□□□ -0.32
NOD1-202ENST00000411552 SERPINE3A8MV23 424 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 SCTP09683 121 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
NOD1-202ENST00000411552 HES1Q14469 280 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 LYG1Q8N1E2 194 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 OR13F1Q8NGS4 319 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 OR5H6Q8NGV6 325 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 AKR1E2Q96JD6 320 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 CITED1Q99966 193 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 PRSS22Q9GZN4 317 aa13.04□□□□□ -0.32
NOD1-202ENST00000411552 IGHV3-72A0A0B4J1Y9 119 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 TRDCB7Z8K6 153 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 IGKV1D-33P01593 117 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 IGKV1-33P01594 117 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 AMY1AP04745 511 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 AMY2AP04746 511 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 FCGR3AP08637 254 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 RPS19P39019 145 aaKnown RBP13.03□□□□□ -0.32
NOD1-202ENST00000411552 SCAND1P57086 179 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 HNF4GQ14541 408 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 TGIF2LXQ8IUE1 241 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 ODF3L1Q8IXM7 274 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 DTX3Q8N9I9 347 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 OR2AK2Q8NG84 335 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 SLC25A38Q96DW6 304 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 PARP12Q9H0J9 701 aaKnown RBP13.03□□□□□ -0.32
NOD1-202ENST00000411552 SERTAD4Q9NUC0 356 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 RHBDL2Q9NX52 303 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 OR1A1Q9P1Q5 309 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 SLC23A1Q9UHI7 598 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 ELF5Q9UKW6 265 aaPredicted RBP13.03□□□□□ -0.32
NOD1-202ENST00000411552 ETV7Q9Y603 341 aa13.03□□□□□ -0.32
NOD1-202ENST00000411552 IGKV1-6A0A0C4DH72 117 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 TXNL1O43396 289 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 LANCL1O43813 399 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 TMEM11P17152 192 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 ARFRP1Q13795 201 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 CDNFQ49AH0 187 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 C11orf88Q6PI97 169 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 IZUMO1Q8IYV9 350 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 KLHDC1Q8N7A1 406 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 SGMS2Q8NHU3 365 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 MAFIPQ8WZ33 124 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 IFI27L2Q9H2X8 130 aa13.02□□□□□ -0.33
NOD1-202ENST00000411552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.02□□□□□ -0.33
NOD1-202ENST00000411552 ZNF230Q9UIE0 474 aaPredicted RBP13.02□□□□□ -0.33
NOD1-202ENST00000411552 VWFP04275 2813 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 ZNF736B4DX44 427 aaPredicted RBP13.01□□□□□ -0.33
NOD1-202ENST00000411552 ST8SIA5O15466 376 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 HSPA12AO43301 675 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 SCGNO76038 276 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 LPLP06858 475 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 VSIG10L2P0DP72 767 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 ZBTB25P24278 435 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 CEACAM6P40199 344 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 OR3A3P47888 321 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 NCS1P62166 190 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 EBI3Q14213 229 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 HERPUD1Q15011 391 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 ARL6IP1Q15041 203 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 TMEM95Q3KNT9 176 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 ABCA11PQ4W5N1 156 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 CROCCP3Q8IVE0 287 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 MRPS26Q9BYN8 205 aaKnown RBP13.01□□□□□ -0.33
NOD1-202ENST00000411552 MOB4Q9Y3A3 225 aa13.01□□□□□ -0.33
NOD1-202ENST00000411552 SAA2-SAA4A0A096LPE2 208 aa13□□□□□ -0.33
NOD1-202ENST00000411552 TMEM235A6NFC5 223 aa13□□□□□ -0.33
NOD1-202ENST00000411552 SH2D7A6NKC9 451 aaPredicted RBP13□□□□□ -0.33
NOD1-202ENST00000411552 M0QZK8 103 aa13□□□□□ -0.33
NOD1-202ENST00000411552 FABP7O15540 132 aa13□□□□□ -0.33
NOD1-202ENST00000411552 TMEM127O75204 238 aa13□□□□□ -0.33
NOD1-202ENST00000411552 GSTP1P09211 210 aaKnown RBP13□□□□□ -0.33
NOD1-202ENST00000411552 SAA2P0DJI9 122 aaPredicted RBP13□□□□□ -0.33
NOD1-202ENST00000411552 CD1BP29016 333 aa13□□□□□ -0.33
NOD1-202ENST00000411552 TALDO1P37837 337 aa13□□□□□ -0.33
NOD1-202ENST00000411552 VDAC2P45880 294 aaPredicted RBP13□□□□□ -0.33
NOD1-202ENST00000411552 VBP1P61758 197 aa13□□□□□ -0.33
NOD1-202ENST00000411552 KIR2DS1Q14954 304 aa13□□□□□ -0.33
NOD1-202ENST00000411552 ARSJQ5FYB0 599 aaPredicted RBP13□□□□□ -0.33
NOD1-202ENST00000411552 HACD4Q5VWC8 232 aa13□□□□□ -0.33
NOD1-202ENST00000411552 ZNF833PQ6ZTB9 187 aa13□□□□□ -0.33
NOD1-202ENST00000411552 OR4A4PQ8NGN8 299 aa13□□□□□ -0.33
NOD1-202ENST00000411552 RBMXL1Q96E39 390 aaKnown RBP13□□□□□ -0.33
NOD1-202ENST00000411552 EAF1Q96JC9 268 aaPredicted RBP13□□□□□ -0.33
NOD1-202ENST00000411552 MRPL20Q9BYC9 149 aaKnown RBP13□□□□□ -0.33
NOD1-202ENST00000411552 C11orf54Q9H0W9 315 aaPredicted RBP13□□□□□ -0.33
NOD1-202ENST00000411552 SPATA2Q9UM82 520 aa13□□□□□ -0.33
NOD1-202ENST00000411552 WNK1Q9H4A3 2382 aa13□□□□□ -0.33
NOD1-202ENST00000411552 MGAM2Q2M2H8 2515 aa12.99□□□□□ -0.33
NOD1-202ENST00000411552 ITGB1BP1O14713 200 aa12.99□□□□□ -0.33
NOD1-202ENST00000411552 GSTT2P0CG29 244 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms