RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 RAB32Q13637 225 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 EDDM3AQ14507 147 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 ESCO2Q56NI9 601 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 SP5Q6BEB4 398 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-206ENST00000409754 ZNF295-AS1Q8N0V1 137 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 INO80EQ8NBZ0 244 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-206ENST00000409754 ZNRF1Q8ND25 227 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 IL22RA2Q969J5 263 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 ARL11Q969Q4 196 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 FAM234AQ9H0X4 552 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 MS4A5Q9H3V2 200 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 SAP30LQ9HAJ7 183 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 DYNLRB1Q9NP97 96 aa11.73□□□□□ -0.53
LIMS2-206ENST00000409754 RBM7Q9Y580 266 aaKnown RBP11.73□□□□□ -0.53
LIMS2-206ENST00000409754 CSMD1Q96PZ7 3565 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 PIGBOS1A0A0B4J2F0 54 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 SPINT2O43291 252 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 CDS2O95674 445 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 IGLV2-14P01704 120 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 F2RP25116 425 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 MST1LQ2TV78 715 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 TMEM268Q5VZI3 342 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 MEX3BQ6ZN04 569 aaKnown RBP11.72□□□□□ -0.53
LIMS2-206ENST00000409754 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 ZNF695Q8IW36 515 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 SELENOHQ8IZQ5 122 aaKnown RBP11.72□□□□□ -0.53
LIMS2-206ENST00000409754 C1orf87Q8N0U7 546 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 ZBTB34Q8NCN2 500 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 OR52L2PQ8NGH6 319 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 DCUN1D4Q92564 292 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 NINJ1Q92982 152 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 PARP12Q9H0J9 701 aaKnown RBP11.72□□□□□ -0.53
LIMS2-206ENST00000409754 ZNF665Q9H7R5 613 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 PDZD2O15018 2839 aa11.72□□□□□ -0.53
LIMS2-206ENST00000409754 CYSRT1A8MQ03 144 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 LGALS8O00214 317 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 TNFSF12O43508 249 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 PLAUP00749 431 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 OR8U9P0C7N5 309 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 SSTR5P35346 364 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 HTR2BP41595 481 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 AP2S1P53680 142 aaPredicted RBP11.71□□□□□ -0.53
LIMS2-206ENST00000409754 EXOSC2Q13868 293 aaKnown RBP11.71□□□□□ -0.53
LIMS2-206ENST00000409754 MSMO1Q15800 293 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 SLC51BQ86UW2 128 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 ZCCHC24Q8N2G6 241 aaKnown RBP11.71□□□□□ -0.53
LIMS2-206ENST00000409754 OR8U1Q8NH10 309 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 C14orf79Q96F83 325 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 SPOCK3Q9BQ16 436 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 TMEM204Q9BSN7 226 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 CISD1Q9NZ45 108 aaKnown RBP11.71□□□□□ -0.53
LIMS2-206ENST00000409754 OR6C3Q9NZP0 311 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 DYSFO75923 2080 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 CACNA1DQ01668 2161 aa11.71□□□□□ -0.53
LIMS2-206ENST00000409754 TRAV38-1A0A0B4J264 116 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 DEFB108AA8MXU0 73 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 SIGLEC5O15389 551 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 CFDP00746 253 aaPredicted RBP11.71□□□□□ -0.54
LIMS2-206ENST00000409754 LOXP28300 417 aaPredicted RBP11.71□□□□□ -0.54
LIMS2-206ENST00000409754 S100A10P60903 97 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 ZNF672Q499Z4 452 aaPredicted RBP11.71□□□□□ -0.54
LIMS2-206ENST00000409754 TGIF2LYQ8IUE0 185 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 ZNF645Q8N7E2 425 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 DEFB108BQ8NET1 73 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 RBPMSQ93062 196 aaKnown RBP11.71□□□□□ -0.54
LIMS2-206ENST00000409754 GPHA2Q96T91 129 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 ZFP57Q9NU63 452 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 DCAF16Q9NXF7 216 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 OR5AC2Q9NZP5 309 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 UBQLN2Q9UHD9 624 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 KCNS2Q9ULS6 477 aa11.71□□□□□ -0.54
LIMS2-206ENST00000409754 KIAA2026Q5HYC2 2103 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 A0A1W2PPR1 153 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 NKX6-3A6NJ46 265 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 TMEM178BH3BS89 294 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 BCL2L11O43521 198 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 GYPAP02724 150 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 RLN2P04090 185 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
LIMS2-206ENST00000409754 EDDM3BP56851 147 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 GNMTQ14749 295 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 SMCO1Q147U7 214 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 SWI5Q1ZZU3 235 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 SLC7A5P1Q8MH63 180 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 DRAM1Q8N682 238 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 CCL13Q99616 98 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 SPIN2AQ99865 258 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 SPIN2BQ9BPZ2 258 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 RAB9BQ9NP90 201 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 OR2S2Q9NQN1 319 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 TMEM106BQ9NUM4 274 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 JPT1Q9UK76 154 aa11.7□□□□□ -0.54
LIMS2-206ENST00000409754 PPIAL4EA0A075B759 164 aa11.69□□□□□ -0.54
LIMS2-206ENST00000409754 RNF212BA8MTL3 300 aa11.69□□□□□ -0.54
LIMS2-206ENST00000409754 PPIAL4DF5H284 164 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms