RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SHANK3Q9BYB0 1731 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 ZFPL1O95159 310 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 FAM106AQ4KMX7 169 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 WDR25Q64LD2 544 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-203ENST00000409672 RGP1Q92546 391 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-203ENST00000409672 AQP10Q96PS8 301 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 C7orf69Q9H7B7 122 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 IGHV1-45A0A0A0MS14 117 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 C11orf94C9JXX5 98 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 TSPAN2O60636 221 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 TRGV3P03979 118 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 C11orf87Q6NUJ2 197 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 OR1L8Q8NGR8 309 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 DUX3Q96PT4 197 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 ZNF275Q9NSD4 429 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-203ENST00000409672 TMED3Q9Y3Q3 217 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM56-RWDD3S4R434 201 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 B4E171 279 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 DAOP14920 347 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 RIGQ13278 110 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 BAK1Q16611 211 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 PRSS27Q9BQR3 290 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 COL6A6A6NMZ7 2263 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 PAPPAQ13219 1627 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 COMPP49747 757 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-203ENST00000409672 SUMO2P61956 95 aaKnown RBP7.32□□□□□ -1.24
SCN9A-203ENST00000409672 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-203ENST00000409672 ABHD17AQ96GS6 310 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 STARD10Q9Y365 291 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 OTX1P32242 354 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-203ENST00000409672 FAM27E3Q08E93 113 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 RNF212Q495C1 297 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 PGLYRP4Q96LB8 373 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 GABARAPL3Q9BY60 117 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 LRRC75BQ2VPJ9 315 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 VGLL1Q99990 258 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 NHSQ6T4R5 1651 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 RAB29O14966 203 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 HIST1H1AQ02539 215 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-203ENST00000409672 HIST3H3Q16695 136 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM255AQ5JRV8 349 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 GATA6Q92908 595 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 GON7Q9BXV9 100 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 IGSF23A1L1A6 192 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 LIPT2A6NK58 231 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 CX3CL1P78423 397 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 C9orf40Q8IXQ3 194 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 FAM24BQ8N5W8 94 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 KLHDC1Q8N7A1 406 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 LHFPL5Q8TAF8 219 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 FRRS1LQ9P0K9 344 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 MPC1Q9Y5U8 109 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 LNP1A1A4G5 178 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 SUCLG1P53597 346 aaKnown RBP7.31□□□□□ -1.24
SCN9A-203ENST00000409672 ATP6V1FQ16864 119 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 INO80CQ6PI98 192 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-203ENST00000409672 SLC25A42Q86VD7 318 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 ZDHHC22Q8N966 263 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 PAXXQ9BUH6 204 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 MPDZO75970 2070 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 IGHV1-69-2A0A0G2JMI3 117 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 IER3P46695 156 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 GABRA6Q16445 453 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 KHDC3LQ587J8 217 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 OR10D4PQ8NGN7 298 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 CACFD1Q9UGQ2 172 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 MALP21145 153 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 ABHD12Q8N2K0 398 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 LINC01587Q99440 93 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM38BQ9NVV0 291 aa7.31□□□□□ -1.24
SCN9A-203ENST00000409672 EDIL3O43854 480 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 FAM201AQ5SY85 155 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 RGPD3A6NKT7 1758 aaPredicted RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 AHDC1Q5TGY3 1603 aaPredicted RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 TRAV8-7A0A075B6U6 113 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 NKX2-2O95096 273 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 TDGF1P13385 188 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 MFAP2P55001 183 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 BAP18Q8IXM2 172 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 SHISA5Q8N114 240 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 SAA1P0DJI8 122 aaPredicted RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 RAB40CQ96S21 281 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 DTX4Q9Y2E6 619 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 ZNF256Q9Y2P7 627 aaPredicted RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 TRGV2A0A075B6R0 118 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 A0A1W2PS18 150 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM189A5PLL7 270 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 IGLV3-25P01717 112 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 EVX1P49640 407 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 MOGAT2Q3SYC2 334 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM177Q53S58 311 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 MESTQ5EB52 335 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 CLLU1Q5K131 121 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 OR2W3Q7Z3T1 314 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 NPIPB6E9PJ23 425 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 PSCAO43653 123 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 CTAG2O75638 210 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 KLF9Q13886 244 aaPredicted RBP7.3□□□□□ -1.24
SCN9A-203ENST00000409672 ZIC1Q15915 447 aa7.3□□□□□ -1.24
SCN9A-203ENST00000409672 ZAR1Q86SH2 424 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms