RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 GCM1Q9NP62 436 aa5.25□□□□□ -1.57
GTF3C3-202ENST00000409364 ZC4H2Q9NQZ6 224 aa5.25□□□□□ -1.57
GTF3C3-202ENST00000409364 MED9Q9NWA0 146 aa5.25□□□□□ -1.57
GTF3C3-202ENST00000409364 COQ3Q9NZJ6 369 aa5.25□□□□□ -1.57
GTF3C3-202ENST00000409364 OR5AC2Q9NZP5 309 aa5.25□□□□□ -1.57
GTF3C3-202ENST00000409364 PPP1R3CQ9UQK1 317 aa5.25□□□□□ -1.57
GTF3C3-202ENST00000409364 AUP1Q9Y679 476 aa5.25□□□□□ -1.57
GTF3C3-202ENST00000409364 LAMA5O15230 3695 aa5.25□□□□□ -1.57
GTF3C3-202ENST00000409364 TLN1Q9Y490 2541 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 A0A1B0GU03 582 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 C17orf100A8MU93 164 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 CCL21O00585 134 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 NMBP08949 121 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 HKR1P10072 659 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 RRASP10301 218 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 SLC25A6P12236 298 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 EGR1P18146 543 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 PVALBP20472 110 aaPredicted RBP5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 P2RY1P47900 373 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 FAM209AQ5JX71 171 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 NCMAPQ5T1S8 102 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 FOXRED2Q8IWF2 684 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 ZNF645Q8N7E2 425 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 TCTEX1D1Q8N7M0 179 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 OR4D5Q8NGN0 318 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 OR1L1Q8NH94 360 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 ANGPTL6Q8NI99 470 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 LHFPL5Q8TAF8 219 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 MRGPRDQ8TDS7 321 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 RNASE6Q93091 150 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 SDSLQ96GA7 329 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 FAM234AQ9H0X4 552 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 MS4A5Q9H3V2 200 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 ZFAND3Q9H8U3 227 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 OR2S2Q9NQN1 319 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 LIN7CQ9NUP9 197 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 OR6C3Q9NZP0 311 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 LSM5Q9Y4Y9 91 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 POMT1Q9Y6A1 747 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 CADP27708 2225 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 HEATR1Q9H583 2144 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 POLEQ07864 2286 aa5.24□□□□□ -1.57
GTF3C3-202ENST00000409364 MED19A0JLT2 244 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 ODAMA1E959 279 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 NKX2-6A6NCS4 301 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 KCNAB3O43448 404 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 TNFSF12O43508 249 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 GPR137BO60478 399 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 JTBO76095 146 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 ATG12O94817 140 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 IGLV2-14P01704 120 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 C1QTNF9P0C862 333 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 MMP9P14780 707 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 APOBEC3AP31941 199 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 NKX2-1P43699 371 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 ID3Q02535 119 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 SNTB1Q13884 538 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 SPRNQ5BIV9 151 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 NMSQ5H8A3 153 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 TEX36Q5VZQ5 186 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 UNQ6494/PRO21346Q6UXR6 183 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 C1orf87Q8N0U7 546 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 DRAM1Q8N682 238 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 OR52L2PQ8NGH6 319 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 OR52M1Q8NGK5 317 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 OR13A1Q8NGR1 328 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 EDARADDQ8WWZ3 215 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 LSM10Q969L4 123 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 PRORYQ9H606 182 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 CYTL1Q9NRR1 136 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 FAM212BQ9NTI7 297 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 PFDN2Q9UHV9 154 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 KCNS2Q9ULS6 477 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 DSPP15924 2871 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 ZGRF1Q86YA3 2104 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 IGHV3OR15-7A0A075B7D8 119 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 TRAV38-1A0A0B4J264 116 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 MSGN1A6NI15 193 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 C15orf65H3BRN8 121 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 ADAM20O43506 726 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 YPEL1O60688 119 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 GAPDHP04406 335 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 CD3EP07766 207 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 P2RX3P56373 397 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 BPIFB3P59826 476 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 CCL8P80075 99 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 HOXA4Q00056 320 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 CATR1Q13166 79 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 EDDM3AQ14507 147 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 ZNF66Q6ZN08 573 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 COMMD7Q86VX2 200 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 KDF1Q8NAX2 398 aaPredicted RBP5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 ZNRF1Q8ND25 227 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 OR51H1Q8NH63 302 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 RFESDQ8TAC1 157 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 UBALD1Q8TB05 177 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 RNF141Q8WVD5 230 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 C14orf79Q96F83 325 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 PLPPR2Q96GM1 343 aa5.23□□□□□ -1.57
GTF3C3-202ENST00000409364 YPEL2Q96QA6 119 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms