RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TFF3Q07654 80 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 IL13RA2Q14627 380 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 ICAM4Q14773 271 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 FAM201AQ5SY85 155 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 DHRS13Q6UX07 377 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 NUFIP2Q7Z417 695 aaKnown RBP7.11□□□□□ -1.27
SNX13-201ENST00000409076 MOB3AQ96BX8 217 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 OR51M1Q9H341 326 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 MYOZ1Q9NP98 299 aaPredicted RBP7.11□□□□□ -1.27
SNX13-201ENST00000409076 KALRNO60229 2985 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 YKT6O15498 198 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 SYNGR3O43761 229 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 RAMP3O60896 148 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 COX6A1P12074 109 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 SLC25A6P12236 298 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 HERPUD1Q15011 391 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 Q6ZPA2 131 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 LYPD6Q86Y78 171 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 FAM58AQ8N1B3 248 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 ASB13Q8WXK3 278 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 HEYLQ9NQ87 328 aaPredicted RBP7.11□□□□□ -1.27
SNX13-201ENST00000409076 STRAPQ9Y3F4 350 aaKnown RBP7.11□□□□□ -1.27
SNX13-201ENST00000409076 LTBP2Q14767 1821 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 MUC22E2RYF6 1773 aaPredicted RBP7.11□□□□□ -1.27
SNX13-201ENST00000409076 OR6C6A6NF89 314 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 LAMTOR5O43504 91 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 SYNGR2O43760 224 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 ZG16O60844 167 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 FAM27BQ5VT28 67 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 NHLRC2Q8NBF2 726 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 ARV1Q9H2C2 271 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 ATP23Q9Y6H3 246 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 TMEM131Q92545 1883 aa7.11□□□□□ -1.27
SNX13-201ENST00000409076 TRBV6-7A0A0A0MS04 114 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 IGHV1-45A0A0A0MS14 117 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 GJE1A6NN92 205 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 TMEM127O75204 238 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 MT-CO3P00414 261 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 NTF3P20783 257 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 GALR1P47211 349 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 GNG10P50151 68 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 CCL11P51671 97 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 RAC3P60763 192 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 ELOBQ15370 118 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 HMGN3Q15651 99 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 TCEAL7Q9BRU2 100 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 LOXL2Q9Y4K0 774 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 K7N7A8 449 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 FCGR3BO75015 233 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 VAMP5O95183 116 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 MGST1P10620 155 aaKnown RBP7.1□□□□□ -1.27
SNX13-201ENST00000409076 VDAC1P21796 283 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 HOXC12P31275 282 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 SSTR5P35346 364 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 PMELP40967 661 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 TDHQ8IZJ6 230 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 ATP5SQ99766 215 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 DERL1Q9BUN8 251 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 KCNIP1Q9NZI2 227 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 ZNF107Q9UII5 783 aaPredicted RBP7.1□□□□□ -1.27
SNX13-201ENST00000409076 IGKV1-6A0A0C4DH72 117 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 A0A0U1RQV5 110 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 CLDN34H7C241 214 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 MPLP40238 635 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 PCBD1P61457 104 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 TMEM41BQ5BJD5 291 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 FAM89BQ8N5H3 189 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 RCC1LQ96I51 464 aaKnown RBP7.1□□□□□ -1.27
SNX13-201ENST00000409076 IER2Q9BTL4 223 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 UCK1Q9HA47 277 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 IL17BQ9UHF5 180 aa7.1□□□□□ -1.27
SNX13-201ENST00000409076 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.09□□□□□ -1.272e-6■■■■■ 30.4
SNX13-201ENST00000409076 A0A1W2PRD5 423 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 A0A1W2PRF3 423 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 A0A1W2PRM7 423 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 RPL36A-HNRNPH2H7BZ11 118 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 TIMM8AO60220 97 aaPredicted RBP7.09□□□□□ -1.27
SNX13-201ENST00000409076 OR1C1Q15619 314 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 WDR74Q6RFH5 385 aaPredicted RBP7.09□□□□□ -1.27
SNX13-201ENST00000409076 ATOH7Q8N100 152 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 ST6GALNAC3Q8NDV1 305 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 OR10G4Q8NGN3 311 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 OR10G9Q8NGN4 311 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 OR10G7Q8NGN6 311 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 CT55Q8WUE5 264 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 DUSP23Q9BVJ7 150 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 SAMD10Q9BYL1 202 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 FOXD3Q9UJU5 478 aaPredicted RBP7.09□□□□□ -1.27
SNX13-201ENST00000409076 PAM16Q9Y3D7 125 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 IGHV3-21A0A0B4J1V1 117 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 hCG_38984A0A1B0GV85 526 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 A6NNC1 897 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 NUDT19A8MXV4 375 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 GAPDHP04406 335 aaKnown RBP7.09□□□□□ -1.27
SNX13-201ENST00000409076 F2RP25116 425 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 PSMB3P49720 205 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 COL10A1Q03692 680 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 PDLIM3Q53GG5 364 aaPredicted RBP7.09□□□□□ -1.27
SNX13-201ENST00000409076 DCAF12Q5T6F0 453 aa7.09□□□□□ -1.27
SNX13-201ENST00000409076 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms