RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 GALMQ96C23 342 aa15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 RCC1LQ96I51 464 aaKnown RBP15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 AK6Q9Y3D8 172 aaKnown RBP15.17■□□□□ 0.02
SMARCB1-204ENST00000407422 YPEL1O60688 119 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 OR3A3P47888 321 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 THBS3P49746 956 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 SVOPQ8N4V2 548 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 KLHL30-AS1Q8NEE0 82 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 OR8H1Q8NGG4 311 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 RITA1Q96K30 269 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 YPEL2Q96QA6 119 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 MRPL20Q9BYC9 149 aaKnown RBP15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 LPAR5Q9H1C0 372 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 ZFP57Q9NU63 452 aa15.16■□□□□ 0.02
SMARCB1-204ENST00000407422 NUDT19A8MXV4 375 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 SOCS1O15524 211 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 NAPSAO96009 420 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 CPEP16870 476 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 COMMD1Q8N668 190 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 IL1F10Q8WWZ1 152 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 PLGRKTQ9HBL7 147 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 ISYNA1Q9NPH2 558 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 PLEKHJ1Q9NW61 149 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 COL7A1Q02388 2944 aa15.15■□□□□ 0.02
SMARCB1-204ENST00000407422 RPLP1P05386 114 aaKnown RBP15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 SLC2A2P11168 524 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 ARSBP15848 533 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 SOX6P35712 828 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 KRTAP10-11P60412 298 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 FABP5Q01469 135 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 MLLT11Q13015 90 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 PNLIPRP3Q17RR3 467 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 ZNF880Q6PDB4 577 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 TEX38Q6PEX7 206 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 PRSS48Q7RTY5 328 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 OR51D1Q8NGF3 324 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 SETD6Q8TBK2 473 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 DUX3Q96PT4 197 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 HDHD3Q9BSH5 251 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 CHMP1AQ9HD42 196 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 ABRACLQ9P1F3 81 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 RRP15Q9Y3B9 282 aaKnown RBP15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 LRRC42Q9Y546 428 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 SAA2-SAA4A0A096LPE2 208 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 SLC17A2O00624 439 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 SAA2P0DJI9 122 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 CNTFRP26992 372 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 CLDN12P56749 244 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 MMDQ15546 238 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 LY6G6FQ5SQ64 297 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 IZUMO2Q6UXV1 221 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 ZNF833PQ6ZTB9 187 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 ZNF695Q8IW36 515 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 OR2AK2Q8NG84 335 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 MGLLQ99685 303 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 NABP2Q9BQ15 211 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 IFI27L2Q9H2X8 130 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 AK3Q9UIJ7 227 aa15.14■□□□□ 0.01
SMARCB1-204ENST00000407422 ST8SIA5O15466 376 aa15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 RGS11O94810 467 aa15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 CALRP27797 417 aaKnown RBP15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 HOXD3P31249 432 aaPredicted RBP15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 TRAM1Q15629 374 aa15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 FAM89BQ8N5H3 189 aa15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 CNBD2Q96M20 576 aa15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 P2RX4Q99571 388 aa15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 PARP12Q9H0J9 701 aaKnown RBP15.13■□□□□ 0.01
SMARCB1-204ENST00000407422 FOXI3A8MTJ6 420 aaPredicted RBP15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 ARL6IP5O75915 188 aa15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 DUS4LO95620 317 aaKnown RBP15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 ACTBP60709 375 aa15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 CFHR3Q02985 330 aa15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 RAB11BQ15907 218 aa15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 RAX2Q96IS3 184 aa15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 URM1Q9BTM9 101 aaKnown RBP15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 GON7Q9BXV9 100 aa15.12■□□□□ 0.01
SMARCB1-204ENST00000407422 K7EIL1 84 aa15.11■□□□□ 0.01
SMARCB1-204ENST00000407422 PSMA1P25786 263 aaKnown RBP15.11■□□□□ 0.01
SMARCB1-204ENST00000407422 SLC6A1P30531 599 aa15.11■□□□□ 0.01
SMARCB1-204ENST00000407422 TMEM50BP56557 158 aa15.11■□□□□ 0.01
SMARCB1-204ENST00000407422 DEFB136Q30KP8 78 aa15.11■□□□□ 0.01
SMARCB1-204ENST00000407422 VCX3BQ9H321 246 aa15.11■□□□□ 0.01
SMARCB1-204ENST00000407422 STEAP1Q9UHE8 339 aa15.11■□□□□ 0.01
SMARCB1-204ENST00000407422 ZNF107Q9UII5 783 aaPredicted RBP15.11■□□□□ 0.01
SMARCB1-204ENST00000407422 IGF1P05019 195 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 MYCNOSP40205 109 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 VEGFCP49767 419 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 FOXE3Q13461 319 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 RPL39P5Q59GN2 51 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 CXorf66Q5JRM2 361 aaPredicted RBP15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 RNF152Q8N8N0 203 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 ARHGAP5-AS1Q96IT6 56 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 ZNF251Q9BRH9 671 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 DNAH9Q9NYC9 4486 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 TRBV6-6A0A0A6YYG2 114 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 WI2-2373I1.2A0A1W2PRP0 233 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 IGHG4P01861 327 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 VDAC1P21796 283 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 PLA2G7Q13093 441 aa15.1■□□□□ 0.01
SMARCB1-204ENST00000407422 SSX1Q16384 188 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms