RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TBL1XR1Q9BZK7 514 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 FGF23Q9GZV9 251 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 DSN1Q9H410 356 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 GNG8Q9UK08 70 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ABCC10Q5T3U5 1492 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 ARAP1Q96P48 1450 aa3.14□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 LINC00862A6NCI5 91 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM159BA6NKW6 160 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CLDN24A6NM45 220 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF705GA8MUZ8 300 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 NDUFC2-KCTD14E9PQ53 114 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 MANBAO00462 879 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 MYL12BO14950 172 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 GYG2O15488 501 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF207O43670 478 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PDE6DO43924 150 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 BANF1O75531 89 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 HAND1O96004 215 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PDYNP01213 254 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 C8GP07360 202 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CELP19835 753 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 SDC4P31431 198 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 TAS2R31P59538 309 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 DYNLL1P63167 89 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 RUNX1Q01196 453 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR2F1Q13607 317 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 C16orf72Q14CZ0 275 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 NEDD8Q15843 81 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 LRRC75BQ2VPJ9 315 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CDNFQ49AH0 187 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CCSMST1Q4G0I0 132 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM78AQ5JUQ0 283 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 OPN5Q6U736 354 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 TMPPEQ6ZT21 453 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CPNE9Q8IYJ1 553 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 GAPTQ8N292 157 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZCCHC24Q8N2G6 241 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 DRAM1Q8N682 238 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 Q8N7P7 452 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR10A6Q8NH74 314 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR1S1Q8NH92 325 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 FAM45AQ8TCE6 357 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 Q8WTZ3 238 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 CLDN23Q96B33 292 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PYURFQ96I23 114 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 NARS2Q96I59 477 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PPP3R2Q96LZ3 170 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 DHX35Q9H5Z1 703 aaKnown RBP3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 PLEKHF2Q9H8W4 249 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 GLS2Q9UI32 602 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 TBX21Q9UL17 535 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 MED14O60244 1454 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 NAV1Q8NEY1 1877 aa3.13□□□□□ -1.91
HMGB1P13-201ENST00000406019 SMARCA4P51532 1647 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OVOS2A0A0J9YW53 1432 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 NOS1P29475 1434 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OVOS2Q6IE36 1432 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 GAPVD1Q14C86 1478 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 ARHGAP35Q9NRY4 1499 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 A0A087WUJ7 227 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 MEIKINA0A087WXM9 373 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 TRAV8-6A0A0B4J262 113 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 VPS37CA5D8V6 355 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 PPP5D1E7EU14 171 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 H0YJW9 148 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SSNA1O43805 119 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 CCNE2O96020 404 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 IGLV2-8P01709 118 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 APCSP02743 223 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 RLN2P04090 185 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 COPZ1P61923 177 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 PKIAP61925 76 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 BTN3A2P78410 334 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 PSG4Q00888 419 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SPA17Q15506 151 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 UBE2SQ16763 222 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 CEACAM21Q3KPI0 293 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OCIAD2Q56VL3 154 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 TTC32Q5I0X7 151 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 PABPC1L2AQ5JQF8 200 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 WDR86Q86TI4 376 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF567Q8N184 647 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SPICQ8N5J4 248 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR4K5Q8NGD3 323 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR1J4Q8NGS1 313 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 BIRC8Q96P09 236 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SIGMAR1Q99720 223 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SUCNR1Q9BXA5 334 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 OR51I1Q9H343 314 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 MAP1LC3AQ9H492 121 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 TAS2R13Q9NYV9 303 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNRD1Q9P1U0 126 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 ZNF222Q9UK12 451 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 SSR3Q9UNL2 185 aa3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 UTP11Q9Y3A2 253 aaKnown RBP3.12□□□□□ -1.91
HMGB1P13-201ENST00000406019 HSPE1-MOB4S4R3N1 261 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms