RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 VSIG10L2P0DP72 767 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 AKR1D1P51857 326 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 OR2B8PP59922 312 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 ERVFRD-1P60508 538 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 CCDC168Q8NDH2 2452 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 OR10Z1Q8NGY1 313 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 SCARB1Q8WTV0 552 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 CCL19Q99731 98 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 OR51I2Q9H344 312 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 RPH3ALQ9UNE2 315 aa7.71□□□□□ -1.17
LIG4-202ENST00000405925 ANKRD34BA5PLL1 514 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 LYNX1G3V0Z9 82 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 RAB29O14966 203 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 OR5G3P0C626 314 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 LYNX1P0DP58 116 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 NQO2P16083 231 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 OTX1P32242 354 aaPredicted RBP7.71□□□□□ -1.18
LIG4-202ENST00000405925 KIR2DS2P43631 304 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 HGFACQ04756 655 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 TMEM267Q0VDI3 215 aaPredicted RBP7.71□□□□□ -1.18
LIG4-202ENST00000405925 FAM74A1Q5RGS3 127 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 OR2C3Q8N628 320 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 ZBTB34Q8NCN2 500 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 VSTM2AQ8TAG5 236 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 GNPNAT1Q96EK6 184 aaPredicted RBP7.71□□□□□ -1.18
LIG4-202ENST00000405925 C14orf79Q96F83 325 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 RAB40CQ96S21 281 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 TM2D1Q9BX74 207 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 GPR132Q9UNW8 380 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 CEP192Q8TEP8 1941 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 ABCA1O95477 2261 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 PPIAL4CA0A0B4J2A2 164 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 CT45A6P0DMU7 189 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 CT45A5P0DMU8 189 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 CT45A7P0DMV0 189 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 PPIAL4GP0DN37 164 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 G6PCP35575 357 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 PEA15Q15121 130 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 TNXAQ16473 311 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 CT45A1Q5HYN5 189 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 LCN15Q6UWW0 184 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 CCDC28AQ8IWP9 274 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 CT45A3Q8NHU0 189 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 ZNF596Q8TC21 504 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 FLYWCH2Q96CP2 140 aaKnown RBP7.71□□□□□ -1.18
LIG4-202ENST00000405925 NEIL1Q96FI4 390 aaPredicted RBP7.71□□□□□ -1.18
LIG4-202ENST00000405925 SDHCQ99643 169 aaPredicted RBP7.71□□□□□ -1.18
LIG4-202ENST00000405925 GFI1Q99684 422 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 NUDT16L1Q9BRJ7 211 aaKnown RBP7.71□□□□□ -1.18
LIG4-202ENST00000405925 DCTN5Q9BTE1 182 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 CHODLQ9H9P2 273 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 HILPDAQ9Y5L2 63 aa7.71□□□□□ -1.18
LIG4-202ENST00000405925 DENND4AQ7Z401 1863 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 UBE2L5PA0A1B0GUS4 154 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 C7orf66A4D0T2 115 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 HMGB3O15347 200 aaKnown RBP7.7□□□□□ -1.18
LIG4-202ENST00000405925 TFF1P04155 84 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 PGA5P0DJD9 388 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 THBS3P49746 956 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 FOXL2NBQ6ZUU3 175 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 OVCH2Q7RTZ1 564 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 RNF138Q8WVD3 245 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 PERPQ96FX8 193 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 ST6GAL2Q96JF0 529 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 ARV1Q9H2C2 271 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 MIOXQ9UGB7 285 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 OPN4Q9UHM6 478 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 TMEM131Q92545 1883 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 SYNGR2O43760 224 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 H2AFB1P0C5Y9 115 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 DAOP14920 347 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 ZNF14P17017 642 aaPredicted RBP7.7□□□□□ -1.18
LIG4-202ENST00000405925 MMDQ15546 238 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 WDR82Q6UXN9 313 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 ETV3LQ6ZN32 361 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 OR11H7Q8NGC8 314 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 LILRB4Q8NHJ6 448 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 MOB3AQ96BX8 217 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 ALX4Q9H161 411 aaPredicted RBP7.7□□□□□ -1.18
LIG4-202ENST00000405925 RHOFQ9HBH0 211 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 FAM215AQ9Y5M1 114 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 NOTCH3Q9UM47 2321 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 IGKV1-12A0A0C4DH73 117 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 IGKV1D-12P01611 117 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 FGF2P09038 288 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 PRSS54Q6PEW0 395 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 ZNF561Q8N587 486 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 WDR31Q8NA23 367 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 OR5C1Q8NGR4 320 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 SUN5Q8TC36 379 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 ST8SIA2Q92186 375 aa7.7□□□□□ -1.18
LIG4-202ENST00000405925 A0A0U1RQK1 487 aa7.69□□□□□ -1.18
LIG4-202ENST00000405925 C12orf77C9JDV5 145 aa7.69□□□□□ -1.18
LIG4-202ENST00000405925 ERVH48-1M5A8F1 160 aa7.69□□□□□ -1.18
LIG4-202ENST00000405925 BCL2L11O43521 198 aa7.69□□□□□ -1.18
LIG4-202ENST00000405925 LILRA1O75019 489 aa7.69□□□□□ -1.18
LIG4-202ENST00000405925 FABP1P07148 127 aa7.69□□□□□ -1.18
LIG4-202ENST00000405925 PDLIM4P50479 330 aa7.69□□□□□ -1.18
LIG4-202ENST00000405925 WDFY1Q8IWB7 410 aa7.69□□□□□ -1.18
LIG4-202ENST00000405925 CORO2AQ92828 525 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms