RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 RCC1LQ96I51 464 aaKnown RBP9.08□□□□□ -0.96
CLIP4-204ENST00000404424 CTDSP1Q9GZU7 261 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 VSIRQ9H7M9 311 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 ZNF665Q9H7R5 613 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 KCNS2Q9ULS6 477 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 KLF13Q9Y2Y9 288 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-204ENST00000404424 DMRT1Q9Y5R6 373 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 A0A1W2PR80 420 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 KLRC4-KLRK1H3BQV0 150 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 SIRPB1O00241 398 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 SH2D1BO14796 132 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BKO60814 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 WDR1O75083 606 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 MT-CO3P00414 261 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BJP06899 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BOP23527 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BBP33778 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 CEACAM6P40199 344 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BDP58876 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BCP62807 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 MRPL49Q13405 166 aaKnown RBP9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST2H2BEQ16778 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HAPLN4Q86UW8 402 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 C1orf210Q8IVY1 113 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 FGFRL1Q8N441 504 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 PRR18Q8N4B5 295 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 TMEM105Q8N8V8 129 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 SCCPDHQ8NBX0 429 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BHQ93079 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 FAM210BQ96KR6 192 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BNQ99877 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 HIST1H2BMQ99879 126 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 BCL2L14Q9BZR8 327 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 PLA2G3Q9NZ20 509 aa9.08□□□□□ -0.96
CLIP4-204ENST00000404424 OPN1MWP04001 364 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 SP1P08047 785 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 PGA5P0DJD9 388 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 OPN1MW2P0DN77 364 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 OPN1MW3P0DN78 364 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 ZNF16P17020 682 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-204ENST00000404424 MEOX1P50221 254 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 NKX6-1P78426 367 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-204ENST00000404424 SLC10A1Q14973 349 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 ATP6V1FQ16864 119 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 SPANXN5Q5MJ07 72 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 TMEM164Q5U3C3 297 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 TMEM14EPQ6UXP3 125 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 CENPVQ7Z7K6 275 aaPredicted RBP9.07□□□□□ -0.96
CLIP4-204ENST00000404424 DRAM1Q8N682 238 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 TAF15Q92804 592 aaKnown RBP eCLIP9.07□□□□□ -0.96
CLIP4-204ENST00000404424 OR4C12Q96R67 309 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 OR51B6Q9H340 312 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 ZMAT5Q9UDW3 170 aaKnown RBP9.07□□□□□ -0.96
CLIP4-204ENST00000404424 WDR87Q6ZQQ6 2873 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 TRAV20A0A0B4J274 112 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 IFITM10A6NMD0 228 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 NDUFS6O75380 124 aaKnown RBP9.07□□□□□ -0.96
CLIP4-204ENST00000404424 TRGC2P03986 189 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 MSMO1Q15800 293 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 LINC00696Q6ZRV3 163 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 EDARADDQ8WWZ3 215 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 C12orf49Q9H741 205 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 FOXJ2Q9P0K8 574 aa9.07□□□□□ -0.96
CLIP4-204ENST00000404424 TRBV24-1A0A075B6N3 115 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 MAP1LC3B2A6NCE7 125 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 PPP1R2P9O14990 202 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 NXPH2O95156 264 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 SLC38A11Q08AI6 406 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 GABRA6Q16445 453 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 SPATA46Q5T0L3 261 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 FIP1L1Q6UN15 594 aaKnown RBP9.06□□□□□ -0.96
CLIP4-204ENST00000404424 WDR86Q86TI4 376 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 ZNF645Q8N7E2 425 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 AGMATQ9BSE5 352 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 MAP1LC3BQ9GZQ8 125 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 SLC39A9Q9NUM3 307 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 KCNIP1Q9NZI2 227 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 HSPB7Q9UBY9 170 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 TRAV39A0A0B4J263 110 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 TMEM210A6NLX4 147 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 CEBPZOSA8MTT3 80 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 ZNF737O75373 536 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 SPINK2P20155 84 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 FGF8P55075 233 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-204ENST00000404424 TNFRSF9Q07011 255 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 C3AR1Q16581 482 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 PYY3Q5JQD4 70 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 SMOC1Q9H4F8 434 aa9.06□□□□□ -0.96
CLIP4-204ENST00000404424 C3orf80F5H4A9 247 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 CDIPTO14735 213 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
CLIP4-204ENST00000404424 SMPD2O60906 423 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 MBP02144 154 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 RAC2P15153 192 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 SELEP16581 610 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 CD81P60033 236 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 PPP1CBP62140 327 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 FAM209BQ5JX69 171 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms