RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 FAM57AQ8TBR7 257 aa11.9□□□□□ -0.5
CACNA1C-211ENST00000399617 ZNF418Q8TF45 676 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-211ENST00000399617 DUSP21Q9H596 190 aa11.9□□□□□ -0.5
CACNA1C-211ENST00000399617 MRPL54Q6P161 138 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-211ENST00000399617 C9orf106Q8NAJ2 232 aa11.9□□□□□ -0.5
CACNA1C-211ENST00000399617 FOXH1O75593 365 aa11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 SSTR5P35346 364 aa11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 ANGPTL6Q8NI99 470 aa11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 AMELYQ99218 206 aa11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 SLC2A9Q9NRM0 540 aa11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 LINC00527Q9UJ94 153 aa11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 OR2W1Q9Y3N9 320 aa11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 CCL27Q9Y4X3 112 aa11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.51
CACNA1C-211ENST00000399617 HSBP1O75506 76 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 CADM3Q8N126 398 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 OR52M1Q8NGK5 317 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 ZNF586Q9NXT0 402 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 RCC2Q9P258 522 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 RGPD3A6NKT7 1758 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 HSPB1P04792 205 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 ADIPOR1Q96A54 375 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 H0YL77 283 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 TTRP02766 147 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 SFTA3P0C7M3 94 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 LAMTOR1Q6IAA8 161 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 TRAV34A0A0B4J273 112 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 RBM11P57052 281 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 LSMEM1Q8N8F7 131 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 BCL2L11O43521 198 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 ISG15P05161 165 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 FAM106AQ4KMX7 169 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 WFDC6Q9BQY6 131 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 ZNF426Q9BUY5 554 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 HIST1H1EP10412 219 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 MPV17LQ2QL34 196 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 CLEC18BQ6UXF7 455 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 LDLRAD3Q86YD5 345 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 RAX2Q96IS3 184 aa11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 TECRQ9NZ01 308 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-211ENST00000399617 CEACAM18A8MTB9 384 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 PPOXP50336 477 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 VWCEQ96DN2 955 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 FXYD3Q14802 87 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 PTX4Q96A99 478 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 OR2T8A6NH00 312 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 B9A039 149 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 SNRNP40Q96DI7 357 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 P01737 135 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 LIPFP07098 398 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 GABRA6Q16445 453 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 LRRC75AQ8NAA5 344 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 LPAR3Q9UBY5 353 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 CACFD1Q9UGQ2 172 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 MGST3O14880 152 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 DHRS11Q6UWP2 260 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 LPAR5Q9H1C0 372 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 FBXL17Q9UF56 701 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 VSIG8P0DPA2 414 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 ELOVL5Q9NYP7 299 aa11.88□□□□□ -0.51
CACNA1C-211ENST00000399617 ATAD5Q96QE3 1844 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 NPBWR2P48146 333 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 TMEM50BP56557 158 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 IGKV1D-33P01593 117 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 IGKV1-33P01594 117 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 RNF133Q8WVZ7 376 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 FCN1O00602 326 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 ADAM11O75078 769 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 CD59P13987 128 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 KIR3DL2P43630 455 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 KLF9Q13886 244 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 FAM210BQ96KR6 192 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 HIST1H3AP68431 136 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 NRN1LQ496H8 165 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 RGP1Q92546 391 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 U3KQ87 197 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 FAM27BQ5VT28 67 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 SLC25A42Q86VD7 318 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 PITPNC1Q9UKF7 332 aa11.87□□□□□ -0.51
CACNA1C-211ENST00000399617 C9JCJ5 164 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 GUK1Q16774 197 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 IL36RNQ9UBH0 155 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 NINQ8N4C6 2090 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 FAM216BQ8N7L0 139 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 C1orf162Q8NEQ5 155 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 RPS4Y2Q8TD47 263 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 CHST5Q9GZS9 411 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 SCN4AP35499 1836 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 C1QTNF9BB2RNN3 333 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 RGS13O14921 159 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 SRSF10O75494 262 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 C1QTNF9P0C862 333 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 PTBP1P26599 531 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 PSMB2P49721 201 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 COLCA1Q6ZS62 124 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
CACNA1C-211ENST00000399617 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms