RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 ZFAND5O76080 213 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 NXPH2O95156 264 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 CSN3P07498 182 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 C1QTNF9P0C862 333 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 EN2P19622 333 aaPredicted RBP8.04□□□□□ -1.12
COL28A1-201ENST00000399429 F2RP25116 425 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 PLP1P60201 277 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 FAM90A2PQ658T7 463 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 ZNF818PQ6ZRF7 136 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 CPT1CQ8TCG5 803 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 MEGF9Q9H1U4 602 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 NRN1Q9NPD7 142 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 OR1A1Q9P1Q5 309 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 LHFPL6Q9Y693 200 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 ZNF318Q5VUA4 2279 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 CEACAM8P31997 349 aaPredicted RBP8.04□□□□□ -1.12
COL28A1-201ENST00000399429 PMCHL1Q16048 86 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 VWA1Q6PCB0 445 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 Q6ZVH6 145 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 GATAD1Q8WUU5 269 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 CDH20Q9HBT6 801 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.04□□□□□ -1.12
COL28A1-201ENST00000399429 GNG12Q9UBI6 72 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 SHANK1Q9Y566 2161 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 A0A1W2PRS3 328 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 APCSP02743 223 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 FXYD3Q14802 87 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 TRAT1Q6PIZ9 186 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 OR2T6Q8NHC8 308 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 RHBDD1Q8TEB9 315 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 APOBEC3DQ96AK3 386 aaPredicted RBP8.04□□□□□ -1.12
COL28A1-201ENST00000399429 RAB37Q96AX2 223 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 RTN4RQ9BZR6 473 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 TMEM191AQ9H0A3 160 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 PCED1AQ9H1Q7 454 aa8.04□□□□□ -1.12
COL28A1-201ENST00000399429 TDRD6O60522 2096 aaKnown RBP8.04□□□□□ -1.12
COL28A1-201ENST00000399429 MDC1Q14676 2089 aaKnown RBP8.04□□□□□ -1.12
COL28A1-201ENST00000399429 PRAMEF26H0Y7S4 382 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 K7EQS6 105 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 CIDEAO60543 219 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 CEACAM6P40199 344 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 RND2P52198 227 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 BPIFB3P59826 476 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 ASPHD2Q6ICH7 369 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 TMEM211Q6ICI0 200 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 PLXDC1Q8IUK5 500 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 KCNK17Q96T54 332 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 PATJQ8NI35 1801 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 ZNF207O43670 478 aaKnown RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 SRSF10O75494 262 aaKnown RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 AARDQ4LEZ3 155 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 C1orf185Q5T7R7 199 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 OR52L2PQ8NGH6 319 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 Q96M66 194 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 QTRT1Q9BXR0 403 aaKnown RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 KCNIP2Q9NS61 270 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 AHCTF1Q8WYP5 2266 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 MS4A18H0YCH9 400 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 NRG2O14511 850 aaPredicted RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 ITGB1BP1O14713 200 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 TOX3O15405 576 aaPredicted RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 DUX1O43812 170 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 SMIM10L1P0DMW3 83 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 COMPP49747 757 aaPredicted RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 CLDN15P56746 228 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 MS4A18Q3C1V0 323 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 C12orf54Q6X4T0 127 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 SSX8Q7RTT4 187 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 MSI2Q96DH6 328 aaKnown RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 SMIM10Q96HG1 83 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 LOXL4Q96JB6 756 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 A0A096LPE4 126 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 A0A1W2PPZ6 126 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 LIPT2A6NK58 231 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 SNAI2O43623 268 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 OR10J4P0C629 311 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 ARL3P36405 182 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 MFAP2P55001 183 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 UBE2G1P62253 170 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 SCGB2A2Q13296 93 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 MMD2Q8IY49 270 aa8.03□□□□□ -1.12
COL28A1-201ENST00000399429 ZNF385AQ96PM9 386 aaKnown RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 MRPS17Q9Y2R5 130 aaKnown RBP8.03□□□□□ -1.12
COL28A1-201ENST00000399429 CENPFP49454 3210 aa8.02□□□□□ -1.12
COL28A1-201ENST00000399429 FAM157AC9JC47 383 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 GNG7O60262 68 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 RHBDL1O75783 438 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 HOXC12P31275 282 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 CDKN1AP38936 164 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 SOX8P57073 446 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 RELBQ01201 579 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 ZDHHC23Q8IYP9 409 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 OR1F12Q8NHA8 337 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 C18orf12Q96KH6 178 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 GABRG3Q99928 467 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 FGF21Q9NSA1 209 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 ABI3Q9P2A4 366 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 LTBP1Q14766 1721 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 HELTA6NFD8 242 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 TNFSF14O43557 240 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms