RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ARSBP15848 533 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 PPP1CCP36873 323 aaKnown RBP10.58□□□□□ -0.72
VCX3A-202ENST00000398729 RANBP1P43487 201 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 GPR12P47775 334 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 LSAMPQ13449 338 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 HMGN3Q15651 99 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 LY6G6FQ5SQ64 297 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 OR2W3Q7Z3T1 314 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 OR51D1Q8NGF3 324 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 CNBD2Q96M20 576 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 S1PR3Q99500 378 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 MGLLQ99685 303 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 GON7Q9BXV9 100 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 PLSCR3Q9NRY6 295 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 ZFP57Q9NU63 452 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 AURKAIP1Q9NWT8 199 aaPredicted RBP10.58□□□□□ -0.72
VCX3A-202ENST00000398729 BLOC1S6Q9UL45 172 aa10.58□□□□□ -0.72
VCX3A-202ENST00000398729 AK6Q9Y3D8 172 aaKnown RBP10.58□□□□□ -0.72
VCX3A-202ENST00000398729 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 LINC01548A6NM66 108 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 DUS4LO95620 317 aaKnown RBP10.57□□□□□ -0.72
VCX3A-202ENST00000398729 NAPSAO96009 420 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 CALRP27797 417 aaKnown RBP10.57□□□□□ -0.72
VCX3A-202ENST00000398729 SLC6A1P30531 599 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 MAP2K4P45985 399 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 RPL23AP62750 156 aaKnown RBP10.57□□□□□ -0.72
VCX3A-202ENST00000398729 P2RY14Q15391 338 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 RAB11BQ15907 218 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 VAX1Q5SQQ9 334 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 MOB1BQ7L9L4 216 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 C5orf24Q7Z6I8 188 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 SVOPQ8N4V2 548 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 OR2AK2Q8NG84 335 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 SETD6Q8TBK2 473 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 IL1F10Q8WWZ1 152 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 RCC1LQ96I51 464 aaKnown RBP10.57□□□□□ -0.72
VCX3A-202ENST00000398729 LPAR5Q9H1C0 372 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 RIMS4Q9H426 269 aaPredicted RBP10.57□□□□□ -0.72
VCX3A-202ENST00000398729 STEAP1Q9UHE8 339 aa10.57□□□□□ -0.72
VCX3A-202ENST00000398729 A0A0A6YYD4 124 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 NUDT19A8MXV4 375 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 RRP9O43818 475 aaKnown RBP10.56□□□□□ -0.72
VCX3A-202ENST00000398729 SOX6P35712 828 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 PSMD7P51665 324 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 F2RL1P55085 397 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 FABP5Q01469 135 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 TBCEQ15813 527 aaPredicted RBP10.56□□□□□ -0.72
VCX3A-202ENST00000398729 FOXB2Q5VYV0 432 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 ZNF880Q6PDB4 577 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 TEX38Q6PEX7 206 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 ZNF367Q7RTV3 350 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 ODF3L1Q8IXM7 274 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 FAM89BQ8N5H3 189 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 FAM71E2Q8N5Q1 922 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 GFI1Q99684 422 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 ACOT13Q9NPJ3 140 aa10.56□□□□□ -0.72
VCX3A-202ENST00000398729 SOCS1O15524 211 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 THBS3P49746 956 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 MMDQ15546 238 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 PNLIPRP3Q17RR3 467 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 ZNF833PQ6ZTB9 187 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 LINC00482Q8N8I6 264 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 KLHL30-AS1Q8NEE0 82 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 FAM3DQ96BQ1 224 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 NABP2Q9BQ15 211 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 MRPL20Q9BYC9 149 aaKnown RBP10.55□□□□□ -0.72
VCX3A-202ENST00000398729 PIPOXQ9P0Z9 390 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 AK3Q9UIJ7 227 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 HSF4Q9ULV5 492 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 RAB26Q9ULW5 256 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 MGAT4AQ9UM21 535 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 V9GY05 133 aa10.55□□□□□ -0.72
VCX3A-202ENST00000398729 SAA2-SAA4A0A096LPE2 208 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 TRBV6-6A0A0A6YYG2 114 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 SAA2P0DJI9 122 aaPredicted RBP10.54□□□□□ -0.72
VCX3A-202ENST00000398729 VDAC1P21796 283 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 OR3A3P47888 321 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 VEGFCP49767 419 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 CLDN12P56749 244 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 ACTBP60709 375 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 CXorf66Q5JRM2 361 aaPredicted RBP10.54□□□□□ -0.72
VCX3A-202ENST00000398729 FAM71F2Q6NXP2 309 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 ETV3LQ6ZN32 361 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 C8orf86Q6ZUL3 223 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 ZNF695Q8IW36 515 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 MRPL41Q8IXM3 137 aaKnown RBP10.54□□□□□ -0.72
VCX3A-202ENST00000398729 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
VCX3A-202ENST00000398729 HSPB9Q9BQS6 159 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 ZNF251Q9BRH9 671 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 GPR61Q9BZJ8 451 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 IFI27L2Q9H2X8 130 aa10.54□□□□□ -0.72
VCX3A-202ENST00000398729 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.54□□□□□ -0.72
VCX3A-202ENST00000398729 ZNF107Q9UII5 783 aaPredicted RBP10.54□□□□□ -0.72
VCX3A-202ENST00000398729 RAB29O14966 203 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 ST8SIA5O15466 376 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 SLC2A2P11168 524 aaPredicted RBP10.53□□□□□ -0.72
VCX3A-202ENST00000398729 ZBTB25P24278 435 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 MYCNOSP40205 109 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 HLA-DRB3P79483 266 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms