RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HOXB1P14653 301 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 DYNLT3P51808 116 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 TESK1Q15569 626 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF429Q86V71 674 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SLC30A7Q8NEW0 376 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF502Q8TBZ5 544 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 NIT2Q9NQR4 276 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 FOXJ2Q9P0K8 574 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF727A8MUV8 499 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 IFNA1P01562 189 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 TFF1P04155 84 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 TNFSF4P23510 183 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 GABRA2P47869 451 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 RAB11AP62491 216 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF816Q0VGE8 651 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 NUFIP2Q7Z417 695 aaKnown RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CALHM1Q8IU99 346 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 C15orf54Q8N8G6 183 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 OR2M7Q8NG81 312 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM171Q8WVE6 324 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 LPAR3Q9UBY5 353 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 DEFB108AA8MXU0 73 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 PSG2P11465 335 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 FGF8P55075 233 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 Q0VFX4 171 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SOHLH1Q5JUK2 328 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF818PQ6ZRF7 136 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 MDP1Q86V88 176 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 EIF4E3Q8N5X7 224 aaKnown RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 SIGLEC12Q96PQ1 595 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 FAM173AQ9BQD7 235 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 TTTY12Q9BZ98 90 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CARHSP1Q9Y2V2 147 aaKnown RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 FRMPD3Q5JV73 1810 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 LOC102723996A0A087X1L8 192 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 LY6G6EA0A0G2JKS1 128 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 hCG_38984A0A1B0GV85 526 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 PGLYRP1O75594 196 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 NXPH2O95156 264 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 HEXAP06865 529 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 HOXA1P49639 335 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-202ENST00000398417 MEOX2P50222 304 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 CLN3Q13286 438 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 IL11RAQ14626 422 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 ANXA2RQ3ZCQ2 193 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 GCNT2Q8N0V5 402 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 U3KQA8 63 aa4.25□□□□□ -1.73
SMAD4-202ENST00000398417 PATJQ8NI35 1801 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 IGLV3-32A0A0A0MS00 114 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 KIR2DS1A0A191URI9 304 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 HELTA6NFD8 242 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 C9JQL5 133 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 SOX15O60248 233 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 WDR1O75083 606 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 TNFSF15O95150 251 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CLDN1O95832 211 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 DEFA4P12838 97 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 KIR2DS4P43632 304 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 KIR2DS1Q14954 304 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF787Q6DD87 383 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 LHFPL1Q86WI0 220 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 NECAP1Q8NC96 275 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 ZNRF1Q8ND25 227 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 OR5C1Q8NGR4 320 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 IMMP1LQ96LU5 166 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 LAMP3Q9UQV4 416 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 AGRNO00468 2067 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 PCNX1Q96RV3 2341 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 ATXN7O15265 892 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CA11O75493 328 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 SEC11BP0C7V7 166 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 HFEQ30201 348 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 WDR54Q9H977 334 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CRIM1Q9NZV1 1036 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 A0A0U1RQV5 110 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 A0A1B0GW15 77 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 SLC31A2O15432 143 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CD63P08962 238 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 TCTAP57738 103 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 FABP9Q0Z7S8 132 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 EDDM3AQ14507 147 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 DHRS11Q6UWP2 260 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 DPPA3Q6W0C5 159 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 PSME4Q14997 1843 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CHD7Q9P2D1 2997 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 A0A1B0GV72 72 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 OR3A1P47881 315 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 DHRS7BQ6IAN0 325 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF600Q6ZNG1 722 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 PAXXQ9BUH6 204 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 LIME1Q9H400 295 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 PROK2Q9HC23 129 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 PLSCR2Q9NRY7 297 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 ZDHHC8Q9ULC8 765 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF256Q9Y2P7 627 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 PTAFRP25105 342 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CTSSP25774 331 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 HTD2P86397 168 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF239Q16600 458 aaKnown RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 TTC32Q5I0X7 151 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms