RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TMEM30BQ3MIR4 351 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 PRAMEF5Q5TYX0 476 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 Q6ZNX1 250 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 LDLRAD3Q86YD5 345 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 ZDHHC22Q8N966 263 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 OR52M1Q8NGK5 317 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 CREB3L1Q96BA8 519 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 GFOD1Q9NXC2 390 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 VSIG4Q9Y279 399 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 OR2W1Q9Y3N9 320 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 JMJD1CQ15652 2540 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 TRAV6A0A075B6T7 132 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 IGKV1D-13A0A0B4J2D9 117 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 LIPFP07098 398 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 IGKV1-13P0DP09 117 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 ECI1P42126 302 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 UCP3P55916 312 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 HERV-K104P61576 105 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 LCN2P80188 198 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 MORN2Q502X0 79 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 UTF1Q5T230 341 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 OR10V1Q8NGI7 309 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 GPR132Q9UNW8 380 aa13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 POLR3KQ9Y2Y1 108 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-205ENST00000397406 A0A1W2PPH5 198 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 YPEL1O60688 119 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 FOXH1O75593 365 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 RBP4P02753 201 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 H2AFB2P0C5Z0 115 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 USF1P22415 310 aaPredicted RBP13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 MECP2P51608 486 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 FXYD4P59646 89 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 SURF2Q15527 256 aaPredicted RBP13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 TOMM40LQ969M1 308 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 DMRTB1Q96MA1 342 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 YPEL2Q96QA6 119 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 MDFIQ99750 246 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 GNG12Q9UBI6 72 aa13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 FBN1P35555 2871 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-205ENST00000397406 FAM172BPA6NC97 362 aa13.87□□□□□ -0.19
TSPAN4-205ENST00000397406 INMT-MINDY4F8WBC2 141 aa13.87□□□□□ -0.19
TSPAN4-205ENST00000397406 CRLF1O75462 422 aa13.87□□□□□ -0.19
TSPAN4-205ENST00000397406 NFYBP25208 207 aa13.87□□□□□ -0.19
TSPAN4-205ENST00000397406 RAG2P55895 527 aa13.87□□□□□ -0.19
TSPAN4-205ENST00000397406 BAMBIQ13145 260 aa13.87□□□□□ -0.19
TSPAN4-205ENST00000397406 LY6G6FQ5SQ64 297 aa13.87□□□□□ -0.19
TSPAN4-205ENST00000397406 SONP18583 2426 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-205ENST00000397406 IGHV2-70DA0A0C4DH43 119 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 ENSAO43768 121 aaKnown RBP13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 CD5LO43866 347 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 IGHV1-8P0DP01 117 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 PGAM2P15259 253 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 RAB25P57735 213 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 Q8N7P7 452 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 ZNF439Q8NDP4 499 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 LEAP2Q969E1 77 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 C1orf159Q96HA4 380 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 RTBDNQ9BSG5 229 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 RSRP1Q9BUV0 290 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 C5orf66Q9H5L9 145 aa13.86□□□□□ -0.19
TSPAN4-205ENST00000397406 SVEP1Q4LDE5 3571 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 A0A087X0M5 115 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 A0A0B4J293 547 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 A0A1B0GVG6 124 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 A0A1B0GX30 115 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 M0R1W7 72 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 ITGB1BP1O14713 200 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 PEX14O75381 377 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 RGS11O94810 467 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 RLN1P04808 185 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 LUMP51884 338 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 KIR3DL3Q8N743 410 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 SECTM1Q8WVN6 248 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 EDARADDQ8WWZ3 215 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 SCGB3A2Q96PL1 93 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 SLC5A7Q9GZV3 580 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 MMP26Q9NRE1 261 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 ONECUT1Q9UBC0 465 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 SESN1Q9Y6P5 492 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 ABCA1O95477 2261 aa13.85□□□□□ -0.19
TSPAN4-205ENST00000397406 VGLL3A8MV65 326 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 IGHV3-7P01780 117 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 CTSDP07339 412 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 OR8U9P0C7N5 309 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 VSIG10L2P0DP72 767 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 PI3P19957 117 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 ANXA7P20073 488 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 GNRHRP30968 328 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 ZNF134P52741 427 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 ARF6P62330 175 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 LOXL1Q08397 574 aaPredicted RBP13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 LPCAT3Q6P1A2 487 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 TMED4Q7Z7H5 227 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 SLC38A6Q8IZM9 456 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 ADAD2Q8NCV1 583 aaKnown RBP13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 OR8U1Q8NH10 309 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 ZFAND1Q8TCF1 268 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 FAM216AQ8WUB2 273 aa13.84□□□□□ -0.19
TSPAN4-205ENST00000397406 AGMATQ9BSE5 352 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms