RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 IGHV1-69P01742 117 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 IL7P13232 177 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 TBPP20226 339 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 NFYAP23511 347 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 PRRX1P54821 245 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 Q3ZCU0 254 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 RNASE10Q5GAN6 216 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 LY6G6FQ5SQ64 297 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 ZNF57Q68EA5 555 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 STEAP1BQ6NZ63 245 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 IL17RELQ6ZVW7 336 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 OVCH2Q7RTZ1 564 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 H1FOOQ8IZA3 346 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 ZNF439Q8NDP4 499 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 TOLLIPQ9H0E2 274 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 PARP12Q9H0J9 701 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 TMEM160Q9NX00 188 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 MTORP42345 2549 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 SLC31A2O15432 143 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 RAB3DO95716 219 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 CD74P04233 296 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 AKAIN1P0CW23 69 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 HNF1AP20823 631 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 FCGR2CP31995 323 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 AP3S2P59780 193 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 DYRK1AQ13627 763 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 RUSC1-AS1Q66K80 236 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 ZNF626Q68DY1 528 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 OR2AK2Q8NG84 335 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 ZNF596Q8TC21 504 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 TINAGL1Q9GZM7 467 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 ZNRD1Q9P1U0 126 aa19.21■□□□□ 0.67
TSPAN4-203ENST00000397397 ODF3BA8MYP8 253 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 FSHBP01225 129 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 IFNA6P05013 189 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 ZNF134P52741 427 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 KLF9Q13886 244 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 CT45A1Q5HYN5 189 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 VAX1Q5SQQ9 334 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 C8orf31Q8N9H6 132 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 BEND2Q8NDZ0 799 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 CT45A3Q8NHU0 189 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 EDARADDQ8WWZ3 215 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 ABHD14AQ9BUJ0 271 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 C11orf54Q9H0W9 315 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 MMP28Q9H239 520 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 ZFHX3Q15911 3703 aa19.2■□□□□ 0.66
TSPAN4-203ENST00000397397 TLN2Q9Y4G6 2542 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 NPFFO15130 113 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 IGLV1-47P01700 117 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 LGALS4P56470 323 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 RIPPLY3P57055 190 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 TSPAN5P62079 268 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 HLA-DRB5Q30154 266 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 BRD3OSQ6XYD6 125 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 SLC25A48Q6ZT89 311 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 LINC00311Q8N616 119 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 OR4D10Q8NGI6 311 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 OR4C16Q8NGL9 310 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 OR10X1Q8NGY0 326 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 NUP50Q9UKX7 468 aa19.19■□□□□ 0.66
TSPAN4-203ENST00000397397 ITGB1BP1O14713 200 aa19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 ST8SIA5O15466 376 aa19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 SRP14P37108 136 aaKnown RBP19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 MEF2DQ14814 521 aa19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 FAAP20Q6NZ36 180 aa19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 OR4P4Q8NGL7 312 aa19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 GIMAP1Q8WWP7 306 aa19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 ABCB10Q9NRK6 738 aa19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 OR2W1Q9Y3N9 320 aa19.18■□□□□ 0.66
TSPAN4-203ENST00000397397 TUSC2O75896 110 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 AMY2AP04746 511 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 AADACP22760 399 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 MIDNQ504T8 468 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 DHRS11Q6UWP2 260 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 OR6F1Q8NGZ6 308 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 SLC6A7Q99884 636 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 ZNF2Q9BSG1 426 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 AMMECR1Q9Y4X0 333 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 RBM7Q9Y580 266 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 LINC00854A0A1B0GVQ3 168 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 DISC1C4P0D8 188 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 OR8U9P0C7N5 309 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 HTR1DP28221 377 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 SAA4P35542 130 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 RAB7AP51149 207 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 TMEM17Q86X19 198 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 PIP4P2Q8N4L2 257 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 OR8U1Q8NH10 309 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 OR56B4Q8NH76 319 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 HRASLSQ9HDD0 168 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 RNF150Q9ULK6 438 aa19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 TBL2Q9Y4P3 447 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-203ENST00000397397 BUB1B-PAK6H3BSN5 160 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 PPYP01298 95 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 FAUP35544 74 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 LUMP51884 338 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 BPIFB3P59826 476 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 HERV-K104P61576 105 aa19.16■□□□□ 0.66
TSPAN4-203ENST00000397397 ZNF660Q6AZW8 331 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms