RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DEFB113Q30KQ7 82 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 FAM90A1Q86YD7 464 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 LGI3Q8N145 548 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 ZNF525Q8N782 197 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 OR5T2Q8NGG2 359 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 TIMD4Q96H15 378 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 REG4Q9BYZ8 158 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 MBNL3Q9NUK0 354 aaKnown RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 UNC79Q9P2D8 2635 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 ANKRD17O75179 2603 aaKnown RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 IGHV3OR15-7A0A075B7D8 119 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 MSGN1A6NI15 193 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 LGALS8O00214 317 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 GPR31O00270 319 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 PPIHO43447 177 aaKnown RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 MUC1P15941 1255 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 LMO1P25800 156 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 PDLIM4P50479 330 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 LUMP51884 338 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 PAN3Q58A45 887 aaKnown RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 TEX36Q5VZQ5 186 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 C5orf24Q7Z6I8 188 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 H1FOOQ8IZA3 346 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-207ENST00000397200 DEFB108BQ8NET1 73 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 OR1S1Q8NH92 325 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 LHFPL5Q8TAF8 219 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 PLPPR1Q8TBJ4 325 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 RAB1CQ92928 201 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 MBD6Q96DN6 1003 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 SHARPINQ9H0F6 387 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 CYTL1Q9NRR1 136 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 GLS2Q9UI32 602 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 WIPI2Q9Y4P8 454 aa12.4□□□□□ -0.42
CAPN3-207ENST00000397200 ARID1AO14497 2285 aa12.4□□□□□ -0.43
CAPN3-207ENST00000397200 TRAV38-1A0A0B4J264 116 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 BET1O15155 118 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 DEDDO75618 318 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 AANATQ16613 207 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 SP6Q3SY56 376 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 TOR2AQ5JU69 321 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 LRRC75A-AS1Q8N1F1 130 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 ANGPTL6Q8NI99 470 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 TMEM56Q96MV1 263 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 TP53RKQ96S44 253 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 ZNF471Q9BX82 626 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-207ENST00000397200 TMEM222Q9H0R3 208 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 OR14J1Q9UGF5 321 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 TMED3Q9Y3Q3 217 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 TMEM56-RWDD3S4R434 201 aa12.39□□□□□ -0.43
CAPN3-207ENST00000397200 POLQO75417 2590 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 C3orf85A0A1B0GTC6 90 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 DUXBA0A1W2PPF3 345 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 MFSD2BA6NFX1 497 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 SIRPB1O00241 398 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 SH2D1BO14796 132 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 PSG2P11465 335 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 RCC1P18754 421 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-207ENST00000397200 GPR6P46095 362 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-207ENST00000397200 P2RX3P56373 397 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 HMGN3Q15651 99 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 AVPI1Q5T686 147 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 CLEC2AQ6UVW9 174 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 ZNF818PQ6ZRF7 136 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 FAM168AQ92567 244 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 CXorf58Q96LI9 332 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 SLC5A7Q9GZV3 580 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 OR2W1Q9Y3N9 320 aa12.38□□□□□ -0.43
CAPN3-207ENST00000397200 F5H0A9 414 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-207ENST00000397200 PHF1O43189 567 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-207ENST00000397200 FSTL3O95633 263 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 HAND1O96004 215 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 IGHV2-70P01814 119 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 UCP1P25874 307 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 LYZL2Q7Z4W2 148 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 PDZD9Q8IXQ8 264 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 ZNF565Q8N9K5 539 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 SECTM1Q8WVN6 248 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 GSKIPQ9P0R6 139 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 IGKV1D-17A0A075B6S4 117 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 NDUFS8O00217 210 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 KCNAB3O43448 404 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 GYPAP02724 150 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 HKR1P10072 659 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 TPT1P13693 172 aaKnown RBP12.37□□□□□ -0.43
CAPN3-207ENST00000397200 PRDX2P32119 198 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 NUP62P37198 522 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-207ENST00000397200 GABRA2P47869 451 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 CEBPDP49716 269 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-207ENST00000397200 DSCR9P59020 149 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 S100A10P60903 97 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 PAX5Q02548 391 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 STUMQ69YW2 141 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 EIF4E3Q8N5X7 224 aaKnown RBP12.37□□□□□ -0.43
CAPN3-207ENST00000397200 BVESQ8NE79 360 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
CAPN3-207ENST00000397200 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms