RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TET1Q8NFU7 2136 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 CXCL3P19876 107 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 H1FOOQ8IZA3 346 aaPredicted RBP9.1□□□□□ -0.95
COL4A4-201ENST00000396625 VN1R2Q8NFZ6 395 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 TBL2Q9Y4P3 447 aaKnown RBP9.1□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM50BP56557 158 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 OR10S1Q8NGN2 331 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 PARLQ9H300 379 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 NRXN3Q9Y4C0 1643 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 A0A0A6YYD5 115 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 TRGV5A0A0B4J1U4 118 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 ANKRD20A5PA0PJZ0 165 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 CCL2P13500 99 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 CYB5R2Q6BCY4 276 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 SLC25A42Q86VD7 318 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 SHISA8B8ZZ34 492 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 CKS1BP61024 79 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 PSG6Q00889 435 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 PABPC1L2AQ5JQF8 200 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM108Q6UXF1 575 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 ASCL5Q7RTU5 278 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 OR4D5Q8NGN0 318 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 RBKSQ9H477 322 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM177Q53S58 311 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 MRPL18Q9H0U6 180 aaKnown RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 IL36RNQ9UBH0 155 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 USF3Q68DE3 2245 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 IGKV3D-15A0A087WSY6 115 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 IGKV3-15P01624 115 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 SUMO2P61956 95 aaKnown RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 OR11G2Q8NGC1 345 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 ASB16Q96NS5 453 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 MMP25Q9NPA2 562 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 TRGC2P03986 189 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 MRPS11P82912 194 aaKnown RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 DPTQ07507 201 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 SH2D5Q6ZV89 423 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 PCGF1Q9BSM1 259 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 PLAUP00749 431 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 RCC1P18754 421 aaPredicted RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 PTCRAQ6ISU1 281 aaPredicted RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 DERL1Q9BUN8 251 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 USP54Q70EL1 1684 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 NKX2-6A6NCS4 301 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 FAM90A27PA6NNH2 459 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 FHITP49789 147 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 NXPH1P58417 271 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF117Q03924 483 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 C2orf88Q9BSF0 95 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 SHISA7A6NL88 538 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 C9orf172C9J069 976 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 MEF2CQ06413 473 aaPredicted RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 LRRC75BQ2VPJ9 315 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 ST6GAL2Q96JF0 529 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 NUBP1P53384 320 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 FAM53BQ14153 422 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 PWWP2BQ6NUJ5 590 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 ADAD2Q8NCV1 583 aaKnown RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 PHOSPHO2Q8TCD6 241 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 RCC2Q9P258 522 aaKnown RBP9.09□□□□□ -0.95
COL4A4-201ENST00000396625 KCNE5Q9UJ90 142 aa9.09□□□□□ -0.95
COL4A4-201ENST00000396625 TNRC6AQ8NDV7 1962 aaKnown RBP9.09□□□□□ -0.96
COL4A4-201ENST00000396625 GALNSP34059 522 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 C12orf73Q69YU5 71 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 MVB12AQ96EY5 273 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 GPR35Q9HC97 309 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 STRCQ7RTU9 1775 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 EWSR1Q01844 656 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL4A4-201ENST00000396625 ZNF707Q96C28 371 aaPredicted RBP9.08□□□□□ -0.96
COL4A4-201ENST00000396625 WDR34Q96EX3 536 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 SPCS1Q9Y6A9 102 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 CGB1A6NKQ9 187 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 VDAC1P21796 283 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 C6orf106Q9H6K1 298 aaPredicted RBP9.08□□□□□ -0.96
COL4A4-201ENST00000396625 IGHV3-21A0A0B4J1V1 117 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 CDKN2AP42771 156 aaKnown RBP9.08□□□□□ -0.96
COL4A4-201ENST00000396625 PATE1Q8WXA2 126 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 LINC00470Q9BZP3 86 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 DMRT1Q9Y5R6 373 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 MOSPD3O75425 235 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 MGAT2Q10469 447 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 RND1Q92730 232 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 RARRES2Q99969 163 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 SLC52A3Q9NQ40 469 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 TREM2Q9NZC2 230 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 MEF2BQ02080 365 aaPredicted RBP9.08□□□□□ -0.96
COL4A4-201ENST00000396625 EIF3IQ13347 325 aaKnown RBP9.08□□□□□ -0.96
COL4A4-201ENST00000396625 OR1L8Q8NGR8 309 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 NBASA2RRP1 2371 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 MDKP21741 143 aaPredicted RBP9.08□□□□□ -0.96
COL4A4-201ENST00000396625 SKP2Q13309 424 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 EAF1Q96JC9 268 aaPredicted RBP9.08□□□□□ -0.96
COL4A4-201ENST00000396625 A0A1B0GWB2 263 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 METTL12A8MUP2 240 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 LINC00596Q86U02 117 aa9.08□□□□□ -0.96
COL4A4-201ENST00000396625 OR2Y1Q8NGV0 311 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms