RNA–Protein interactions for RNA: ENST00000396444.7

USP8-202, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 19,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-202ENST00000396444 SHISA6Q6ZSJ9 500 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 IL21RQ9HBE5 538 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 FRRS1LQ9P0K9 344 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 MPDZO75970 2070 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 CDC14CA4D256 554 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 ZNF737O75373 536 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 MNX1P50219 401 aaPredicted RBP4.31□□□□□ -1.72
USP8-202ENST00000396444 CST9LP1Q5W188 147 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.31□□□□□ -1.725e-6■■■■□ 19.3
USP8-202ENST00000396444 GTSF1LQ9H1H1 148 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 A0A1B0GV50 99 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 J3QT63 122 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 PRELID3AQ96N28 172 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 PXMP4Q9Y6I8 212 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 TMEM272A0A1B0GTI8 110 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 EFSO43281 561 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 ADRA2AP08913 450 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 CD70P32970 193 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 VIPR2P41587 438 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 COL9A3Q14050 684 aaPredicted RBP4.31□□□□□ -1.72
USP8-202ENST00000396444 NKD1Q969G9 470 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 QTRT1Q9BXR0 403 aaKnown RBP4.31□□□□□ -1.72
USP8-202ENST00000396444 CTGFP29279 349 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 DGCR2P98153 550 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 PSG6Q00889 435 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 CDKN3Q16667 212 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 TMEM108Q6UXF1 575 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 NCOR2Q9Y618 2525 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 LRRC3CA6NJW4 275 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 MRPS11P82912 194 aaKnown RBP4.31□□□□□ -1.72
USP8-202ENST00000396444 SLC25A40Q8TBP6 338 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 SPANXB1Q9NS25 103 aaPredicted RBP4.31□□□□□ -1.72
USP8-202ENST00000396444 ST6GALNAC2Q9UJ37 374 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 LRRK2Q5S007 2527 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 E9PQ18 207 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 MGST3O14880 152 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.31□□□□□ -1.72
USP8-202ENST00000396444 SFRP5Q5T4F7 317 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 ZNF511Q8NB15 262 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 PAAF1Q9BRP4 392 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 MRM2Q9UI43 246 aaKnown RBP4.31□□□□□ -1.72
USP8-202ENST00000396444 CRYM-AS1A6NIL9 109 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 SSTR4P31391 388 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 GNB2P62879 340 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 SRSF1Q07955 248 aaKnown RBP eCLIP4.31□□□□□ -1.72
USP8-202ENST00000396444 HES1Q14469 280 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 PLAGL1Q9UM63 463 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 DEFA4P12838 97 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 HOXB3P14651 431 aaPredicted RBP4.31□□□□□ -1.72
USP8-202ENST00000396444 GJA4P35212 333 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 RPEL1Q2QD12 228 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 CNTD2Q9H8S5 307 aa4.31□□□□□ -1.72
USP8-202ENST00000396444 TWIST1Q15672 202 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 ZNF385CQ66K41 422 aaPredicted RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 C8orf31Q8N9H6 132 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 SGMS2Q8NHU3 365 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 PMEPA1Q969W9 287 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 CDC34P49427 236 aaPredicted RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 HBBP68871 147 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 ADAT3Q96EY9 351 aaPredicted RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 ACYP1P07311 99 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 PGFP49763 221 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 PSG9Q00887 426 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 ARL16Q0P5N6 197 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 SLC35E4Q6ICL7 350 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 BHLHA9Q7RTU4 235 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 LRRC75AQ8NAA5 344 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 SRYQ05066 204 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 WIPF2Q8TF74 440 aaPredicted RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 SLC46A2Q9BY10 475 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 NOTCH3Q9UM47 2321 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 ATXN7O15265 892 aaPredicted RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 ARL3P36405 182 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 TMEM91Q6ZNR0 172 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 FOXB1Q99853 325 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 CMC4P56277 68 aaPredicted RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 OR1C1Q15619 314 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 DEFB119Q8N690 84 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 SIRT6Q8N6T7 355 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 LSM5Q9Y4Y9 91 aaKnown RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 FFAR1O14842 300 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 HCRTO43612 131 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 CEACAM6P40199 344 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 TNFRSF9Q07011 255 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 TMEM182Q6ZP80 229 aaPredicted RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 DMRTC2Q8IXT2 367 aaPredicted RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 SMIM20Q8N5G0 67 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 OR2T6Q8NHC8 308 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 VPS25Q9BRG1 176 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 METAP1P53582 386 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 RAB32Q13637 225 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 VAMP3Q15836 100 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 MRPL3P09001 348 aaKnown RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 B4GALNT1Q00973 533 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 FBXW9Q5XUX1 488 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 RBMXL3Q8N7X1 1067 aaKnown RBP4.3□□□□□ -1.72
USP8-202ENST00000396444 ZNF721Q8TF20 911 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 FMC1Q96HJ9 113 aa4.3□□□□□ -1.72
USP8-202ENST00000396444 INSM2Q96T92 566 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms