RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 HMGN3Q15651 99 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 PNLIPRP3Q17RR3 467 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 ZNF554Q86TJ5 538 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 MRPL20Q9BYC9 149 aaKnown RBP14.37□□□□□ -0.11
FXN-203ENST00000396366 ZFP57Q9NU63 452 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 JPT1Q9UK76 154 aa14.37□□□□□ -0.11
FXN-203ENST00000396366 AK6Q9Y3D8 172 aaKnown RBP14.37□□□□□ -0.11
FXN-203ENST00000396366 K7EIL1 84 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 SOCS1O15524 211 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 RGS10O43665 173 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 YPEL1O60688 119 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 SLC2A2P11168 524 aaPredicted RBP14.36□□□□□ -0.11
FXN-203ENST00000396366 TEX38Q6PEX7 206 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 ZNF695Q8IW36 515 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 COMMD1Q8N668 190 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 OR51D1Q8NGF3 324 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 OR6M1Q8NGM8 313 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 SETD6Q8TBK2 473 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 IL1F10Q8WWZ1 152 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 GALMQ96C23 342 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 YPEL2Q96QA6 119 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 NABP2Q9BQ15 211 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 HDHD3Q9BSH5 251 aaPredicted RBP14.36□□□□□ -0.11
FXN-203ENST00000396366 CCDC90BQ9GZT6 254 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 LPAR5Q9H1C0 372 aa14.36□□□□□ -0.11
FXN-203ENST00000396366 WI2-2373I1.2A0A1W2PRP0 233 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 BPNT1O95861 308 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 NAPSAO96009 420 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 CRHBPP24387 322 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 SOX6P35712 828 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 DEFB136Q30KP8 78 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 SVOPQ8N4V2 548 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 OR8H1Q8NGG4 311 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 RAX2Q96IS3 184 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 P2RX4Q99571 388 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 ANKRD60Q9BZ19 345 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 PARP12Q9H0J9 701 aaKnown RBP14.35□□□□□ -0.11
FXN-203ENST00000396366 CHMP1AQ9HD42 196 aaPredicted RBP14.35□□□□□ -0.11
FXN-203ENST00000396366 PLEKHJ1Q9NW61 149 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 AK3Q9UIJ7 227 aa14.35□□□□□ -0.11
FXN-203ENST00000396366 COL7A1Q02388 2944 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 SAA2-SAA4A0A096LPE2 208 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 ST8SIA5O15466 376 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 SAA2P0DJI9 122 aaPredicted RBP14.34□□□□□ -0.11
FXN-203ENST00000396366 CPEP16870 476 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 MYCNOSP40205 109 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 CLDN12P56749 244 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 ACTBP60709 375 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 FABP5Q01469 135 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 CFHR3Q02985 330 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 MMDQ15546 238 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 ZNF880Q6PDB4 577 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 ZNF833PQ6ZTB9 187 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 OR2AK2Q8NG84 335 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 IFI27L2Q9H2X8 130 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 PLGRKTQ9HBL7 147 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 LRRC42Q9Y546 428 aa14.34□□□□□ -0.11
FXN-203ENST00000396366 FOXI3A8MTJ6 420 aaPredicted RBP14.33□□□□□ -0.12
FXN-203ENST00000396366 SLC17A2O00624 439 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 DUS4LO95620 317 aaKnown RBP14.33□□□□□ -0.12
FXN-203ENST00000396366 ARSBP15848 533 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 PLA2G7Q13093 441 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 LY6G6FQ5SQ64 297 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 FAM89BQ8N5H3 189 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 KCTD7Q96MP8 289 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 MGLLQ99685 303 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 ISYNA1Q9NPH2 558 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 ABRACLQ9P1F3 81 aa14.33□□□□□ -0.12
FXN-203ENST00000396366 ZNF107Q9UII5 783 aaPredicted RBP14.33□□□□□ -0.12
FXN-203ENST00000396366 DNAH9Q9NYC9 4486 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 G3V318 75 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 CCL24O00175 119 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 RGS11O94810 467 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 IGF1P05019 195 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 CALRP27797 417 aaKnown RBP14.32□□□□□ -0.12
FXN-203ENST00000396366 TMEM50BP56557 158 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 RAB25P57735 213 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 EGFEM1PQ0D2K5 195 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 MLLT11Q13015 90 aaPredicted RBP14.32□□□□□ -0.12
FXN-203ENST00000396366 FOXE3Q13461 319 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 RAB11BQ15907 218 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 RPL39P5Q59GN2 51 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 DEFB121Q5J5C9 76 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 CXorf66Q5JRM2 361 aaPredicted RBP14.32□□□□□ -0.12
FXN-203ENST00000396366 PRSS48Q7RTY5 328 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 ZNF251Q9BRH9 671 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 GON7Q9BXV9 100 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 WSB1Q9Y6I7 421 aa14.32□□□□□ -0.12
FXN-203ENST00000396366 RRP9O43818 475 aaKnown RBP14.31□□□□□ -0.12
FXN-203ENST00000396366 IGHG4P01861 327 aa14.31□□□□□ -0.12
FXN-203ENST00000396366 VDAC1P21796 283 aa14.31□□□□□ -0.12
FXN-203ENST00000396366 SLC6A1P30531 599 aa14.31□□□□□ -0.12
FXN-203ENST00000396366 CDX1P47902 265 aaPredicted RBP14.31□□□□□ -0.12
FXN-203ENST00000396366 VEGFCP49767 419 aa14.31□□□□□ -0.12
FXN-203ENST00000396366 C2orf76Q3KRA6 126 aa14.31□□□□□ -0.12
FXN-203ENST00000396366 IZUMO2Q6UXV1 221 aa14.31□□□□□ -0.12
FXN-203ENST00000396366 GLDNQ6ZMI3 551 aaPredicted RBP14.31□□□□□ -0.12
FXN-203ENST00000396366 RNF152Q8N8N0 203 aa14.31□□□□□ -0.12
FXN-203ENST00000396366 ARHGAP5-AS1Q96IT6 56 aa14.31□□□□□ -0.12
FXN-203ENST00000396366 ABHD14BQ96IU4 210 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms