RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MSL2Q9HCI7 577 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 SVILO95425 2214 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 DCHS1Q96JQ0 3298 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 TRAPPC2LH3BP13 241 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 PNRC1Q12796 327 aaPredicted RBP12.18□□□□□ -0.46
CLIP2-203ENST00000395060 FAM78BQ5VT40 261 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 TCF23Q7RTU1 214 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF808Q8N4W9 903 aaPredicted RBP12.18□□□□□ -0.46
CLIP2-203ENST00000395060 C10orf35Q96D05 121 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 CDH20Q9HBT6 801 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 TRBV24-1A0A075B6N3 115 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 PAGE4O60829 102 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 LINC00205P59089 165 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 SPCS3P61009 180 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
CLIP2-203ENST00000395060 OR8G5Q8NG78 346 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 SRD5A3Q9H8P0 318 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 CLN8Q9UBY8 286 aa12.18□□□□□ -0.46
CLIP2-203ENST00000395060 MAP1BP46821 2468 aaKnown RBP12.18□□□□□ -0.46
CLIP2-203ENST00000395060 SIRPB1O00241 398 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 NUPR1O60356 82 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 CFIP05156 583 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF816Q0VGE8 651 aaPredicted RBP12.17□□□□□ -0.46
CLIP2-203ENST00000395060 RABEPKQ7Z6M1 372 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 PLPPR2Q96GM1 343 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 NAT8Q9UHE5 227 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 PRR14LQ5THK1 2151 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 IGKV1-5P01602 117 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
CLIP2-203ENST00000395060 TGFBR3Q03167 851 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 ACSM6Q6P461 480 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 MRPL21Q7Z2W9 205 aaKnown RBP12.17□□□□□ -0.46
CLIP2-203ENST00000395060 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 OR5R1Q8NH85 324 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 CCDC74BQ96LY2 380 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 C2orf88Q9BSF0 95 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 PROK2Q9HC23 129 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 SIT1Q9Y3P8 196 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 DVL1O14640 695 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 RHBDL1O75783 438 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 SLC38A11Q08AI6 406 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 MRGPRGQ86SM5 289 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 DNASE2BQ8WZ79 361 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
CLIP2-203ENST00000395060 MRPL37Q9BZE1 423 aaKnown RBP12.17□□□□□ -0.46
CLIP2-203ENST00000395060 IGLV3-32A0A0A0MS00 114 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF320A2RRD8 509 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 OR6C6A6NF89 314 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 H0Y980 276 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 VAMP5O95183 116 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 FGF5P12034 268 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 NUTF2P61970 127 aaKnown RBP12.16□□□□□ -0.46
CLIP2-203ENST00000395060 GCSAMLQ5JQS6 135 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 TMEM42Q69YG0 159 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 SP5Q6BEB4 398 aaPredicted RBP12.16□□□□□ -0.46
CLIP2-203ENST00000395060 MKXQ8IYA7 352 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 OR10D3Q8NH80 312 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 LOC400499M0QZD8 3231 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 IGLV3-12A0A075B6K2 115 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 K7ESF4 209 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 PDGFBP01127 241 aaPredicted RBP12.16□□□□□ -0.46
CLIP2-203ENST00000395060 CEACAM1P13688 526 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 S100GP29377 79 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 DSCR4P56555 118 aaPredicted RBP12.16□□□□□ -0.46
CLIP2-203ENST00000395060 TNFRSF9Q07011 255 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 TFF3Q07654 80 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 TDRG1Q3Y452 100 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 PCSK4Q6UW60 755 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 ASCL4Q6XD76 172 aa12.16□□□□□ -0.46
CLIP2-203ENST00000395060 C19orf25Q9UFG5 118 aaPredicted RBP12.16□□□□□ -0.46
CLIP2-203ENST00000395060 IGHV5-10-1A0A0J9YXX1 117 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 IFNA1P01562 189 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 GYPAP02724 150 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 TFF1P04155 84 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 TAF15Q92804 592 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLIP2-203ENST00000395060 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 PRRG4Q9BZD6 226 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 ATP23Q9Y6H3 246 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 PATE3B3GLJ2 98 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 NAPSAO96009 420 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 CST2P09228 141 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 PSMB3P49720 205 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 TMEM41BQ5BJD5 291 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 OR2T10Q8NGZ9 312 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 RAB40CQ96S21 281 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 WDR61Q9GZS3 305 aaKnown RBP12.15□□□□□ -0.46
CLIP2-203ENST00000395060 PLSCR2Q9NRY7 297 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 OR2W1Q9Y3N9 320 aa12.15□□□□□ -0.46
CLIP2-203ENST00000395060 KIR2DS1A0A191URI9 304 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 LOC102725191A0A1B0GVB3 256 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 G6PCP35575 357 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 KIR2DS4P43632 304 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 SSR4P51571 173 aa12.15□□□□□ -0.47
CLIP2-203ENST00000395060 HBG1P69891 147 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms