RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 HSD17B12Q53GQ0 312 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 RBM48Q5RL73 367 aaKnown RBP6.94□□□□□ -1.3
ATG4A-205ENST00000394892 C6orf183Q5T699 404 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 STEAP3Q658P3 488 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 C8orf86Q6ZUL3 223 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 SLC35E3Q7Z769 313 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 SVOPQ8N4V2 548 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 FAM89BQ8N5H3 189 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 RNF152Q8N8N0 203 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 OR4X2Q8NGF9 303 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 OR2T10Q8NGZ9 312 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 DPF1Q92782 380 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 RAX2Q96IS3 184 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 WWC2-AS2Q96NR7 200 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 P2RX4Q99571 388 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 NABP2Q9BQ15 211 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 GPR61Q9BZJ8 451 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 OR2S2Q9NQN1 319 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 GHRLQ9UBU3 117 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 ZNF107Q9UII5 783 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-205ENST00000394892 AK6Q9Y3D8 172 aaKnown RBP6.94□□□□□ -1.3
ATG4A-205ENST00000394892 IGKV1-6A0A0C4DH72 117 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 NCBP2LA6PVI3 153 aaKnown RBP6.93□□□□□ -1.3
ATG4A-205ENST00000394892 SLC17A2O00624 439 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 RGS10O43665 173 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 YPEL1O60688 119 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 CPEP16870 476 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 HOXD3P31249 432 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-205ENST00000394892 HTD2P86397 168 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 NDPQ00604 133 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 PLAC9Q5JTB6 97 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 GLT8D1Q68CQ7 371 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 ZNF833PQ6ZTB9 187 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 ZNF554Q86TJ5 538 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 CHPT1Q8WUD6 406 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 RCC1LQ96I51 464 aaKnown RBP6.93□□□□□ -1.3
ATG4A-205ENST00000394892 YPEL2Q96QA6 119 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 AGMATQ9BSE5 352 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 ABHD14AQ9BUJ0 271 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 TMEM59Q9BXS4 323 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 KLK15Q9H2R5 256 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 ISYNA1Q9NPH2 558 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 LIN7CQ9NUP9 197 aaKnown RBP6.93□□□□□ -1.3
ATG4A-205ENST00000394892 OR1A1Q9P1Q5 309 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 AK3Q9UIJ7 227 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 KCNK7Q9Y2U2 307 aa6.93□□□□□ -1.3
ATG4A-205ENST00000394892 SAA2-SAA4A0A096LPE2 208 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 TRBV6-6A0A0A6YYG2 114 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 ST8SIA5O15466 376 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 BPNT1O95861 308 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 UBBP0CG47 229 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 HSMCR30P0CW71 290 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 SAA2P0DJI9 122 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-205ENST00000394892 CT45A6P0DMU7 189 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 CT45A5P0DMU8 189 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 CT45A7P0DMV0 189 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-205ENST00000394892 BLVRBP30043 206 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-205ENST00000394892 PPIFP30405 207 aaKnown RBP6.92□□□□□ -1.3
ATG4A-205ENST00000394892 EGFEM1PQ0D2K5 195 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 MLLT11Q13015 90 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-205ENST00000394892 DEFB136Q30KP8 78 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 TMEM30BQ3MIR4 351 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 MOGAT2Q3SYC2 334 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 RPL39P5Q59GN2 51 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 C19orf54Q5BKX5 351 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 KHDC1LQ5JSQ8 128 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 LY6G6FQ5SQ64 297 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 C11orf87Q6NUJ2 197 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 IZUMO2Q6UXV1 221 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 PRSS48Q7RTY5 328 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 NR2C2APQ86WQ0 139 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 OR51D1Q8NGF3 324 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 OR6M1Q8NGM8 313 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 KCNG3Q8TAE7 436 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 THRSPQ92748 146 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 UFD1Q92890 307 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 NEDD4LQ96PU5 975 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 MGLLQ99685 303 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 CST11Q9H112 138 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 SCN3BQ9NY72 215 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 ZMAT5Q9UDW3 170 aaKnown RBP6.92□□□□□ -1.3
ATG4A-205ENST00000394892 JPT1Q9UK76 154 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 TPRKBQ9Y3C4 175 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 FBXO7Q9Y3I1 522 aa6.92□□□□□ -1.3
ATG4A-205ENST00000394892 IGHV7-81A0A0B4J1V7 117 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 A0A0B4J203 849 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 G3V318 75 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 AP4M1O00189 453 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 FCN1O00602 326 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 IGHG4P01861 327 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 IGF1P05019 195 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 SCTP09683 121 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 SLC2A2P11168 524 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-205ENST00000394892 IL3RAP26951 378 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 PSMB8P28062 276 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 OR10A3P58181 314 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 ACTBP60709 375 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 PNLIPRP3Q17RR3 467 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms