RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 SLC2A9Q9NRM0 540 aa11.21□□□□□ -0.61
PTN-202ENST00000393083 OR6C3Q9NZP0 311 aa11.21□□□□□ -0.61
PTN-202ENST00000393083 OR2W1Q9Y3N9 320 aa11.21□□□□□ -0.61
PTN-202ENST00000393083 YLPM1P49750 1951 aaKnown RBP11.21□□□□□ -0.61
PTN-202ENST00000393083 TEX13DA0A0J9YY54 714 aaPredicted RBP11.2□□□□□ -0.62
PTN-202ENST00000393083 CRYM-AS1A6NIL9 109 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 SPINT2O43291 252 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 ADAM20O43506 726 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 DUS4LO95620 317 aaKnown RBP11.2□□□□□ -0.62
PTN-202ENST00000393083 FSTL3O95633 263 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 LY6G6DO95868 133 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 RPS2P15880 293 aaKnown RBP11.2□□□□□ -0.62
PTN-202ENST00000393083 LMO4P61968 165 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 SUPT4H1P63272 117 aaKnown RBP11.2□□□□□ -0.62
PTN-202ENST00000393083 C2orf68Q2NKX9 166 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 LIN54Q6MZP7 749 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 LPCAT3Q6P1A2 487 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 C11orf88Q6PI97 169 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 SGPP2Q8IWX5 399 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 FGFRL1Q8N441 504 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 MITD1Q8WV92 249 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 ZNF486Q96H40 463 aaPredicted RBP11.2□□□□□ -0.62
PTN-202ENST00000393083 TMEM246Q9BRR3 403 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 NCOR1P1Q9H4R4 102 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 RDH8Q9NYR8 311 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 SLC25A10Q9UBX3 287 aaPredicted RBP11.2□□□□□ -0.62
PTN-202ENST00000393083 DOCK11Q5JSL3 2073 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 C15orf65H3BRN8 121 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 HSD17B6O14756 317 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 SLC22A5O76082 557 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 NDUFB7P17568 137 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 CEACAM6P40199 344 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 GNMTQ14749 295 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 LYPD2Q6UXB3 125 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 OR52L2PQ8NGH6 319 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 OR10V1Q8NGI7 309 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 RTN4IP1Q8WWV3 396 aaPredicted RBP11.2□□□□□ -0.62
PTN-202ENST00000393083 C1orf159Q96HA4 380 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 NARFLQ9H6Q4 476 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 NAA60Q9H7X0 242 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 PRR13Q9NZ81 148 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 OPN4Q9UHM6 478 aa11.2□□□□□ -0.62
PTN-202ENST00000393083 TEP1Q99973 2627 aaKnown RBP11.19□□□□□ -0.62
PTN-202ENST00000393083 TRGV10A0A0A0MS01 117 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 SMLR1H3BR10 107 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 GPR31O00270 319 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 TNFRSF13BO14836 293 aaPredicted RBP11.19□□□□□ -0.62
PTN-202ENST00000393083 NDUFB3O43676 98 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 SIX6O95475 246 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 IFNA2P01563 188 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 HEXAP06865 529 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 IGHV4-31P0DP07 118 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 GZMHP20718 246 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 GNRHRP30968 328 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 LUMP51884 338 aaPredicted RBP11.19□□□□□ -0.62
PTN-202ENST00000393083 LTC4SQ16873 150 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 CR1LQ2VPA4 569 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 C11orf91Q3C1V1 193 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 ZNF818PQ6ZRF7 136 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 KCTD9Q7L273 389 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 NLRC3Q7RTR2 1065 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 LDLRAD3Q86YD5 345 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 FAM185AQ8N0U4 392 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 COQ8AQ8NI60 647 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 RFESDQ8TAC1 157 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 PARP12Q9H0J9 701 aaKnown RBP11.19□□□□□ -0.62
PTN-202ENST00000393083 CCL28Q9NRJ3 127 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 CALYQ9NYX4 217 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 CTSZQ9UBR2 303 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 KCNS2Q9ULS6 477 aa11.19□□□□□ -0.62
PTN-202ENST00000393083 RBM7Q9Y580 266 aaKnown RBP11.19□□□□□ -0.62
PTN-202ENST00000393083 IGHV3-43A0A0B4J1X8 118 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 CCSO14618 274 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 NDUFA2O43678 99 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 GIPP09681 153 aaPredicted RBP11.18□□□□□ -0.62
PTN-202ENST00000393083 IGHV3-43DP0DP04 118 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 NKX2-5P52952 324 aaPredicted RBP11.18□□□□□ -0.62
PTN-202ENST00000393083 RND3P61587 244 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 ANKRD55Q3KP44 614 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 LRRC10Q5BKY1 277 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 CLEC9AQ6UXN8 241 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 TCF23Q7RTU1 214 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 OR5M8Q8NGP6 311 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 RAB9BQ9NP90 201 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 OR2S2Q9NQN1 319 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 KAAG1Q9UBP8 84 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 ABCA1O95477 2261 aa11.18□□□□□ -0.62
PTN-202ENST00000393083 A0A0B4J2A0 478 aa11.17□□□□□ -0.62
PTN-202ENST00000393083 CD5LO43866 347 aa11.17□□□□□ -0.62
PTN-202ENST00000393083 IGHV2-5P01817 119 aa11.17□□□□□ -0.62
PTN-202ENST00000393083 C1QBP02746 253 aa11.17□□□□□ -0.62
PTN-202ENST00000393083 OR5AC1P0C628 307 aa11.17□□□□□ -0.62
PTN-202ENST00000393083 PPP1CCP36873 323 aaKnown RBP11.17□□□□□ -0.62
PTN-202ENST00000393083 HTD2P86397 168 aa11.17□□□□□ -0.62
PTN-202ENST00000393083 DCAF12L2Q5VW00 463 aa11.17□□□□□ -0.62
PTN-202ENST00000393083 FAM53AQ6NSI3 398 aaPredicted RBP11.17□□□□□ -0.62
PTN-202ENST00000393083 H1FXQ92522 213 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms