RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 UNC119Q13432 240 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 TMEM241Q24JQ0 296 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 ABLIM2Q6H8Q1 611 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 APELAP0DMC3 54 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 RCC1P18754 421 aaPredicted RBP14.22□□□□□ -0.13
SCN3B-202ENST00000392770 GPR6P46095 362 aaPredicted RBP14.22□□□□□ -0.13
SCN3B-202ENST00000392770 HSD17B13Q7Z5P4 300 aaPredicted RBP14.22□□□□□ -0.13
SCN3B-202ENST00000392770 RASL11BQ9BPW5 248 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 MMP24Q9Y5R2 645 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 M0QZ24 198 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 KLRB1Q12918 225 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 MARS2Q96GW9 593 aaKnown RBP14.22□□□□□ -0.13
SCN3B-202ENST00000392770 LPAR2Q9HBW0 351 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 C1QL2Q7Z5L3 287 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 TMEM171Q8WVE6 324 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 SSMEM1Q8WWF3 244 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 PLXNA4Q9HCM2 1894 aa14.22□□□□□ -0.13
SCN3B-202ENST00000392770 CD74P04233 296 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 FBP1P09467 338 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 P2RY4P51582 365 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 CLRN3Q8NCR9 226 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 C5orf66Q9H5L9 145 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 NPAS1Q99742 590 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 FAM103A1Q9BTL3 118 aaKnown RBP14.21□□□□□ -0.13
SCN3B-202ENST00000392770 NHLH2Q02577 135 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 CLCF1Q9UBD9 225 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 J3QRE1 110 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 GNG4P50150 75 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 ERVS71-1P61550 626 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 NAAAQ02083 359 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 ZNF66Q6ZN08 573 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 MANBALQ9NQG1 85 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 ABCA7Q8IZY2 2146 aa14.21□□□□□ -0.13
SCN3B-202ENST00000392770 FABP9Q0Z7S8 132 aa14.21□□□□□ -0.14
SCN3B-202ENST00000392770 ZNF561Q8N587 486 aa14.21□□□□□ -0.14
SCN3B-202ENST00000392770 ABHD17AQ96GS6 310 aa14.21□□□□□ -0.14
SCN3B-202ENST00000392770 MRPL13Q9BYD1 178 aaKnown RBP14.21□□□□□ -0.14
SCN3B-202ENST00000392770 TCF20Q9UGU0 1960 aaKnown RBP14.2□□□□□ -0.14
SCN3B-202ENST00000392770 J3QW42 95 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 GALR1P47211 349 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 NRN1LQ496H8 165 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 IGHV1-2P23083 117 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 ZNF362Q5T0B9 420 aaPredicted RBP14.2□□□□□ -0.14
SCN3B-202ENST00000392770 SPNS3Q6ZMD2 512 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 SELENOHQ8IZQ5 122 aaKnown RBP14.2□□□□□ -0.14
SCN3B-202ENST00000392770 MFNGO00587 321 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 LGALS7P47929 136 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 BCL2L2Q92843 193 aaPredicted RBP14.2□□□□□ -0.14
SCN3B-202ENST00000392770 PCGF1Q9BSM1 259 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 MST1P26927 711 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 NUBP1P53384 320 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 RNF2Q99496 336 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 J3QR06 171 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 GPHA2Q96T91 129 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 C1QTNF5Q9BXJ0 243 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 ASCL3Q9NQ33 180 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 RNF115Q9Y4L5 304 aa14.2□□□□□ -0.14
SCN3B-202ENST00000392770 CRYBA1P05813 215 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 SRP14P37108 136 aaKnown RBP14.19□□□□□ -0.14
SCN3B-202ENST00000392770 ACSF3Q4G176 576 aaPredicted RBP14.19□□□□□ -0.14
SCN3B-202ENST00000392770 IDI2-AS1Q9NZ38 188 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 ASCC3Q8N3C0 2202 aaKnown RBP14.19□□□□□ -0.14
SCN3B-202ENST00000392770 TECRQ9NZ01 308 aaKnown RBP14.19□□□□□ -0.14
SCN3B-202ENST00000392770 ODAMA1E959 279 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 ERVFRD-1P60508 538 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 CTDSP1Q9GZU7 261 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 ZDHHC11Q9H8X9 412 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 CALYQ9NYX4 217 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 NPIPB7O75200 414 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 NPY1RP25929 384 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 OR1L8Q8NGR8 309 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 ZCCHC14Q8WYQ9 949 aaKnown RBP14.19□□□□□ -0.14
SCN3B-202ENST00000392770 CNTRLQ7Z7A1 2325 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 A0A087WV48 116 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 LRRC3CA6NJW4 275 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 UBE2L3P68036 154 aaKnown RBP14.19□□□□□ -0.14
SCN3B-202ENST00000392770 FAM27E3Q08E93 113 aa14.19□□□□□ -0.14
SCN3B-202ENST00000392770 CECR9P0C854 216 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 TIMM23BQ5SRD1 257 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 TMEM65Q6PI78 240 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 OR4P4Q8NGL7 312 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 DBX1A6NMT0 343 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 PRR32B1ATL7 298 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 NEURL1O76050 574 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 FAM87AP0C7U9 286 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 FAM57AQ8TBR7 257 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 CSRP1P21291 193 aaKnown RBP14.18□□□□□ -0.14
SCN3B-202ENST00000392770 C9orf106Q8NAJ2 232 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 OR10C1Q96KK4 312 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 SPP1P10451 314 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 IGFBP3P17936 291 aaPredicted RBP14.18□□□□□ -0.14
SCN3B-202ENST00000392770 ZNF818PQ6ZRF7 136 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 PARP11Q9NR21 331 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 ATP6V0CP27449 155 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 GLIPR1P48060 266 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 DOLPP1Q86YN1 238 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 C1RLQ9NZP8 487 aa14.18□□□□□ -0.14
SCN3B-202ENST00000392770 IFNL4K9M1U5 179 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 BMI1P35226 326 aa14.17□□□□□ -0.14
SCN3B-202ENST00000392770 MMDQ15546 238 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms