RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZNF770Q6IQ21 691 aaPredicted RBP12.96□□□□□ -0.33
CCDC50-201ENST00000392455 SHISA5Q8N114 240 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 LRTM2Q8N967 370 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 MZB1Q8WU39 189 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 UCP3P55916 312 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 IBA57Q5T440 356 aaKnown RBP12.96□□□□□ -0.33
CCDC50-201ENST00000392455 WIPI2Q9Y4P8 454 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 KBTBD11-OT1A0A1B0GTJ5 212 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 ASAH2BP0C7U1 165 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 PGFP49763 221 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 OR5A1Q8NGJ0 315 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 FAM106AQ4KMX7 169 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 PRSS36Q5K4E3 855 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 KCNK7Q9Y2U2 307 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 AKR7A2O43488 359 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 LDLRAD3Q86YD5 345 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 LINC00615Q96LM1 132 aaPredicted RBP12.96□□□□□ -0.33
CCDC50-201ENST00000392455 PCOLCE2Q9UKZ9 415 aa12.96□□□□□ -0.33
CCDC50-201ENST00000392455 FCMRO60667 390 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 CA6P23280 308 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 YAE1D1Q9NRH1 226 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 ZNF275Q9NSD4 429 aaPredicted RBP12.96□□□□□ -0.34
CCDC50-201ENST00000392455 SLC25A37Q9NYZ2 338 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 TNFSF18Q9UNG2 199 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 PPM1DO15297 605 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 NKX2-8O15522 239 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 HOXD4P09016 255 aaPredicted RBP12.96□□□□□ -0.34
CCDC50-201ENST00000392455 HKR1P10072 659 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.34
CCDC50-201ENST00000392455 RNF122Q9H9V4 155 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 GPR27Q9NS67 375 aa12.96□□□□□ -0.34
CCDC50-201ENST00000392455 LMO7DNF2Z398 122 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 BCL2P10415 239 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 AGERQ15109 404 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 A1L4Q6 167 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 K7N7A8 449 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 FOXF1Q12946 379 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 MMP16P51512 607 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 C2orf83Q53S99 150 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 TCRBV5S1A1TA0A578 114 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 RCC2Q9P258 522 aaKnown RBP12.95□□□□□ -0.34
CCDC50-201ENST00000392455 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
CCDC50-201ENST00000392455 GALNSP34059 522 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 SF3B5Q9BWJ5 86 aaKnown RBP12.95□□□□□ -0.34
CCDC50-201ENST00000392455 PARLQ9H300 379 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 ABCA7Q8IZY2 2146 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 USP54Q70EL1 1684 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 RREB1Q92766 1687 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 COX7A1P24310 79 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 KLF9Q13886 244 aaPredicted RBP12.95□□□□□ -0.34
CCDC50-201ENST00000392455 SP6Q3SY56 376 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 DTX2Q86UW9 622 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 GLCCI1Q86VQ1 547 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 DNASE2BQ8WZ79 361 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 ASB1Q9Y576 335 aa12.95□□□□□ -0.34
CCDC50-201ENST00000392455 LOXL3P58215 753 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 ZNF385DQ9H6B1 395 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 DSPPQ9NZW4 1301 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 SHISA8B8ZZ34 492 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 DAOP14920 347 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 NUBPLQ8TB37 319 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 GPR82Q96P67 336 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 J3QR06 171 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 TUBD1Q9UJT1 453 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 TEX30Q5JUR7 227 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 C10orf111Q8N326 155 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 LRRC61Q9BV99 259 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 SPANXCQ9NY87 97 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 PLA2G3Q9NZ20 509 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 GBF1Q92538 1859 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 C7orf77A4D0Y5 90 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 WNT5AP41221 380 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 C21orf62-AS1Q17RA5 79 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 BHLHA15Q7RTS1 189 aaPredicted RBP12.94□□□□□ -0.34
CCDC50-201ENST00000392455 ZNF714Q96N38 554 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 NEU3Q9UQ49 428 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 OR51B2Q9Y5P1 312 aa12.94□□□□□ -0.34
CCDC50-201ENST00000392455 ETHE1O95571 254 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 GAPDHP04406 335 aaKnown RBP12.93□□□□□ -0.34
CCDC50-201ENST00000392455 CD300LDQ6UXZ3 194 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 TMIGD3P0DMS9 266 aaPredicted RBP12.93□□□□□ -0.34
CCDC50-201ENST00000392455 SSC4DQ8WTU2 575 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 ALG14Q96F25 216 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 LTB4R2Q9NPC1 389 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 RGPD4Q7Z3J3 1758 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 PRR35P0CG20 571 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 TRAV8-7A0A075B6U6 113 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 NDUFA2O43678 99 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 IGLV3-27P01718 113 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 ST3GAL2Q16842 350 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 MESTQ5EB52 335 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 DTX1Q86Y01 620 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 SMIM18P0DKX4 95 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 LHFPL5Q8TAF8 219 aa12.93□□□□□ -0.34
CCDC50-201ENST00000392455 MEGF10Q96KG7 1140 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms