RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SNTB1Q13884 538 aaKnown RBP21.01■□□□□ 0.95
SHOX2-201ENST00000389589 GNMTQ14749 295 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 FAM209AQ5JX71 171 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 ZNRF1Q8ND25 227 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 EGLN1Q9GZT9 426 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 DUX4Q9UBX2 424 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 RAI1Q7Z5J4 1906 aaPredicted RBP21.01■□□□□ 0.95
SHOX2-201ENST00000389589 LRRC30A6NM36 301 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 CYB5R3P00387 301 aaPredicted RBP21.01■□□□□ 0.95
SHOX2-201ENST00000389589 SLC25A6P12236 298 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 TLE1Q04724 770 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 GPR157Q5UAW9 335 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 FAM216AQ8WUB2 273 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 LRRC46Q96FV0 321 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 PLPPR2Q96GM1 343 aa21.01■□□□□ 0.95
SHOX2-201ENST00000389589 FAM201AQ5SY85 155 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 TEX36Q5VZQ5 186 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 OR2D2Q9H210 308 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 OR6C3Q9NZP0 311 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 TANC2Q9HCD6 1990 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 DSCAML1Q8TD84 2053 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 FAM90A27PA6NNH2 459 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 PPP1CCP36873 323 aaKnown RBP21■□□□□ 0.95
SHOX2-201ENST00000389589 CCL8P80075 99 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 C14orf79Q96F83 325 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 RAB9BQ9NP90 201 aa21■□□□□ 0.95
SHOX2-201ENST00000389589 RCL1Q9Y2P8 373 aaKnown RBP21■□□□□ 0.95
SHOX2-201ENST00000389589 GPR137BO60478 399 aa20.99■□□□□ 0.95
SHOX2-201ENST00000389589 CD3EP07766 207 aa20.99■□□□□ 0.95
SHOX2-201ENST00000389589 DMRTC2Q8IXT2 367 aaPredicted RBP20.99■□□□□ 0.95
SHOX2-201ENST00000389589 LSM10Q969L4 123 aaKnown RBP20.99■□□□□ 0.95
SHOX2-201ENST00000389589 DCTN5Q9BTE1 182 aa20.99■□□□□ 0.95
SHOX2-201ENST00000389589 FAM234AQ9H0X4 552 aa20.99■□□□□ 0.95
SHOX2-201ENST00000389589 ZNF665Q9H7R5 613 aa20.99■□□□□ 0.95
SHOX2-201ENST00000389589 A0A1B0GU03 582 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 PVALBP20472 110 aaPredicted RBP20.98■□□□□ 0.95
SHOX2-201ENST00000389589 DMBX1Q8NFW5 382 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 RFESDQ8TAC1 157 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 EDARADDQ8WWZ3 215 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 PFDN2Q9UHV9 154 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 JPT1Q9UK76 154 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 EDDM3BP56851 147 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 LRRC20Q8TCA0 184 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 RNF150Q9ULK6 438 aa20.98■□□□□ 0.95
SHOX2-201ENST00000389589 E7EQL1 145 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 ZNF16P17020 682 aaPredicted RBP20.97■□□□□ 0.95
SHOX2-201ENST00000389589 CXorf58Q96LI9 332 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 GAFA1Q96PS6 74 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 GAPDHP04406 335 aaKnown RBP20.97■□□□□ 0.95
SHOX2-201ENST00000389589 TMEM33P57088 247 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 ID3Q02535 119 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 CATR1Q13166 79 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 FAM74A1Q5RGS3 127 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 ZNF788Q6ZQV5 615 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 RNASE11Q8TAA1 199 aaKnown RBP20.97■□□□□ 0.95
SHOX2-201ENST00000389589 SAP30LQ9HAJ7 183 aa20.97■□□□□ 0.95
SHOX2-201ENST00000389589 F2RL2O00254 374 aa20.96■□□□□ 0.95
SHOX2-201ENST00000389589 MMP9P14780 707 aa20.96■□□□□ 0.95
SHOX2-201ENST00000389589 APOBEC3AP31941 199 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-201ENST00000389589 ADORA2A-AS1P86434 159 aa20.96■□□□□ 0.95
SHOX2-201ENST00000389589 EIF4EBP1Q13541 118 aaPredicted RBP20.96■□□□□ 0.95
SHOX2-201ENST00000389589 C1orf87Q8N0U7 546 aa20.96■□□□□ 0.95
SHOX2-201ENST00000389589 TCTEX1D1Q8N7M0 179 aa20.96■□□□□ 0.95
SHOX2-201ENST00000389589 C11orf1Q9H5F2 150 aa20.96■□□□□ 0.95
SHOX2-201ENST00000389589 FBXL17Q9UF56 701 aa20.96■□□□□ 0.95
SHOX2-201ENST00000389589 PIEZO1Q92508 2521 aa20.96■□□□□ 0.95
SHOX2-201ENST00000389589 IGHV3-43A0A0B4J1X8 118 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.95■□□□□ 0.94
SHOX2-201ENST00000389589 JTBO76095 146 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 IGHV3-43DP0DP04 118 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 ZNF585BQ52M93 769 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 DEFB108BQ8NET1 73 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 GPR146Q96CH1 333 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 MS4A5Q9H3V2 200 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 FAM212BQ9NTI7 297 aaPredicted RBP20.95■□□□□ 0.94
SHOX2-201ENST00000389589 YPEL1O60688 119 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 IGKV1-39P01597 117 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 IGKV1D-39P04432 117 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 EFNB3Q15768 340 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 EIF5AL1Q6IS14 154 aaKnown RBP20.95■□□□□ 0.94
SHOX2-201ENST00000389589 FAM53AQ6NSI3 398 aaPredicted RBP20.95■□□□□ 0.94
SHOX2-201ENST00000389589 YPEL2Q96QA6 119 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 GNG12Q9UBI6 72 aa20.95■□□□□ 0.94
SHOX2-201ENST00000389589 PITX3O75364 302 aa20.94■□□□□ 0.94
SHOX2-201ENST00000389589 AANATQ16613 207 aa20.94■□□□□ 0.94
SHOX2-201ENST00000389589 CXorf66Q5JRM2 361 aaPredicted RBP20.94■□□□□ 0.94
SHOX2-201ENST00000389589 RPL7L1Q6DKI1 246 aaKnown RBP20.94■□□□□ 0.94
SHOX2-201ENST00000389589 LINC01560Q8TB33 94 aa20.94■□□□□ 0.94
SHOX2-201ENST00000389589 MARVELD3Q96A59 401 aa20.94■□□□□ 0.94
SHOX2-201ENST00000389589 DYNLRB1Q9NP97 96 aa20.94■□□□□ 0.94
SHOX2-201ENST00000389589 CALYQ9NYX4 217 aa20.94■□□□□ 0.94
SHOX2-201ENST00000389589 TRAV38-1A0A0B4J264 116 aa20.93■□□□□ 0.94
SHOX2-201ENST00000389589 NKX6-3A6NJ46 265 aa20.93■□□□□ 0.94
SHOX2-201ENST00000389589 LGALS8O00214 317 aa20.93■□□□□ 0.94
SHOX2-201ENST00000389589 SIGLEC5O15389 551 aa20.93■□□□□ 0.94
SHOX2-201ENST00000389589 GYPAP02724 150 aa20.93■□□□□ 0.94
SHOX2-201ENST00000389589 CGB3P0DN86 165 aa20.93■□□□□ 0.94
SHOX2-201ENST00000389589 CGB7P0DN87 165 aa20.93■□□□□ 0.94
SHOX2-201ENST00000389589 POLR2GP62487 172 aaKnown RBP eCLIP20.93■□□□□ 0.94
SHOX2-201ENST00000389589 ZNF66Q6ZN08 573 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms