RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 C2orf68Q2NKX9 166 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 UTF1Q5T230 341 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 KCTD9Q7L273 389 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 OR2AK2Q8NG84 335 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 MITD1Q8WV92 249 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 NAA60Q9H7X0 242 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 PHF1O43189 567 aaPredicted RBP22.1■■□□□ 1.13
MSX1-201ENST00000382723 IFNA2P01563 188 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 PDLIM4P50479 330 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 CMTM1Q8IZ96 169 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 PSMG3-AS1Q96PY0 264 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 FYTTD1Q96QD9 318 aaKnown RBP22.1■■□□□ 1.13
MSX1-201ENST00000382723 BPESC1Q9GZL8 116 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 OR2D2Q9H210 308 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 LINC00574Q9H8X3 128 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 GFOD1Q9NXC2 390 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 PSG11Q9UQ72 335 aa22.1■■□□□ 1.13
MSX1-201ENST00000382723 TRBV23-1A0A0A0MS06 115 aa22.09■■□□□ 1.13
MSX1-201ENST00000382723 GOSR2O14653 212 aa22.09■■□□□ 1.13
MSX1-201ENST00000382723 ST8SIA5O15466 376 aa22.09■■□□□ 1.13
MSX1-201ENST00000382723 SP6Q3SY56 376 aa22.09■■□□□ 1.13
MSX1-201ENST00000382723 TBC1D26Q86UD7 250 aa22.09■■□□□ 1.13
MSX1-201ENST00000382723 PERPQ96FX8 193 aa22.09■■□□□ 1.13
MSX1-201ENST00000382723 GPR37O15354 613 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 MPPED1O15442 326 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 YPEL1O60688 119 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 IGLV2-14P01704 120 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 GNB2P62879 340 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 ANKRD55Q3KP44 614 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 DMRTB1Q96MA1 342 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 YPEL2Q96QA6 119 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 KCNIP3Q9Y2W7 256 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 TACC2O95359 2948 aa22.08■■□□□ 1.13
MSX1-201ENST00000382723 KRTAP10-9P60411 292 aa22.08■■□□□ 1.12
MSX1-201ENST00000382723 C11orf88Q6PI97 169 aa22.08■■□□□ 1.12
MSX1-201ENST00000382723 BVESQ8NE79 360 aa22.08■■□□□ 1.12
MSX1-201ENST00000382723 SLC22A5O76082 557 aa22.07■■□□□ 1.12
MSX1-201ENST00000382723 RGS11O94810 467 aa22.07■■□□□ 1.12
MSX1-201ENST00000382723 SIX6O95475 246 aa22.07■■□□□ 1.12
MSX1-201ENST00000382723 OR5AC1P0C628 307 aa22.07■■□□□ 1.12
MSX1-201ENST00000382723 EDARADDQ8WWZ3 215 aa22.07■■□□□ 1.12
MSX1-201ENST00000382723 ABHD14BQ96IU4 210 aa22.07■■□□□ 1.12
MSX1-201ENST00000382723 F5H0A9 414 aaPredicted RBP22.06■■□□□ 1.12
MSX1-201ENST00000382723 PGLYRP1O75594 196 aaPredicted RBP22.06■■□□□ 1.12
MSX1-201ENST00000382723 RND3P61587 244 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 HIST2H2BCQ6DN03 193 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 DRAM1Q8N682 238 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 MARVELD3Q96A59 401 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 SSBP3Q9BWW4 388 aaPredicted RBP22.06■■□□□ 1.12
MSX1-201ENST00000382723 CHIAQ9BZP6 476 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 RPUSD1Q9UJJ7 312 aaKnown RBP22.06■■□□□ 1.12
MSX1-201ENST00000382723 DSCAML1Q8TD84 2053 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 S100GP29377 79 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 SSTR2P30874 369 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 ZNF134P52741 427 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 ZNF645Q8N7E2 425 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 COQ8AQ8NI60 647 aa22.06■■□□□ 1.12
MSX1-201ENST00000382723 BARX1Q9HBU1 254 aaPredicted RBP22.06■■□□□ 1.12
MSX1-201ENST00000382723 A0A1W2PPE3 182 aa22.05■■□□□ 1.12
MSX1-201ENST00000382723 ANXA3P12429 323 aa22.05■■□□□ 1.12
MSX1-201ENST00000382723 ESCO2Q56NI9 601 aa22.05■■□□□ 1.12
MSX1-201ENST00000382723 HEPN1Q6WQI6 88 aa22.05■■□□□ 1.12
MSX1-201ENST00000382723 FAM168AQ92567 244 aa22.05■■□□□ 1.12
MSX1-201ENST00000382723 TP53RKQ96S44 253 aa22.05■■□□□ 1.12
MSX1-201ENST00000382723 AGMATQ9BSE5 352 aa22.05■■□□□ 1.12
MSX1-201ENST00000382723 ZNF436Q9C0F3 470 aaPredicted RBP22.05■■□□□ 1.12
MSX1-201ENST00000382723 PPIAL4CA0A0B4J2A2 164 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 C3orf85A0A1B0GTC6 90 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 CCSO14618 274 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 SLC31A2O15432 143 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 PPIAL4GP0DN37 164 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 GNG10P50151 68 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 DLX6P56179 175 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 OR52M1Q8NGK5 317 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 GALNT14Q96FL9 552 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 AKR1E2Q96JD6 320 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 FBN2P35556 2912 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 TMEM30BQ3MIR4 351 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 OR51H1Q8NH63 302 aa22.04■■□□□ 1.12
MSX1-201ENST00000382723 C22orf46C9J442 243 aa22.03■■□□□ 1.12
MSX1-201ENST00000382723 IGHV2-5P01817 119 aa22.03■■□□□ 1.12
MSX1-201ENST00000382723 CLEC2AQ6UVW9 174 aa22.03■■□□□ 1.12
MSX1-201ENST00000382723 OR10A7Q8NGE5 316 aa22.03■■□□□ 1.12
MSX1-201ENST00000382723 C5orf30Q96GV9 206 aa22.03■■□□□ 1.12
MSX1-201ENST00000382723 PIMREGQ9BSJ6 248 aa22.03■■□□□ 1.12
MSX1-201ENST00000382723 ABHD14AQ9BUJ0 271 aa22.03■■□□□ 1.12
MSX1-201ENST00000382723 TMEM187Q14656 261 aa22.02■■□□□ 1.12
MSX1-201ENST00000382723 CT45A1Q5HYN5 189 aa22.02■■□□□ 1.12
MSX1-201ENST00000382723 DCAF12L2Q5VW00 463 aa22.02■■□□□ 1.12
MSX1-201ENST00000382723 BTNL3Q6UXE8 466 aa22.02■■□□□ 1.12
MSX1-201ENST00000382723 CT45A3Q8NHU0 189 aa22.02■■□□□ 1.12
MSX1-201ENST00000382723 SUCNR1Q9BXA5 334 aa22.02■■□□□ 1.12
MSX1-201ENST00000382723 SMLR1H3BR10 107 aa22.02■■□□□ 1.11
MSX1-201ENST00000382723 GPR12P47775 334 aa22.02■■□□□ 1.11
MSX1-201ENST00000382723 H2BFSP57053 126 aa22.02■■□□□ 1.11
MSX1-201ENST00000382723 CLDND2Q8NHS1 167 aa22.02■■□□□ 1.11
MSX1-201ENST00000382723 GLYATL2Q8WU03 294 aa22.02■■□□□ 1.11
MSX1-201ENST00000382723 HELZ2Q9BYK8 2649 aaKnown RBP22.01■■□□□ 1.11
MSX1-201ENST00000382723 LOC105371242A0A075B767 164 aa22.01■■□□□ 1.11
MSX1-201ENST00000382723 FAM25EA8MYX2 175 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms