RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 F2RP25116 425 aa12.77□□□□□ -0.37
CTNS-202ENST00000381870 TNFRSF4P43489 277 aa12.77□□□□□ -0.37
CTNS-202ENST00000381870 SUMO3P55854 103 aaPredicted RBP12.77□□□□□ -0.37
CTNS-202ENST00000381870 HBG1P69891 147 aa12.77□□□□□ -0.37
CTNS-202ENST00000381870 HBG2P69892 147 aa12.77□□□□□ -0.37
CTNS-202ENST00000381870 SPTSSAQ969W0 71 aa12.77□□□□□ -0.37
CTNS-202ENST00000381870 NEIL1Q96FI4 390 aaPredicted RBP12.77□□□□□ -0.37
CTNS-202ENST00000381870 ZDHHC11Q9H8X9 412 aa12.77□□□□□ -0.37
CTNS-202ENST00000381870 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
CTNS-202ENST00000381870 ELOVL5Q9NYP7 299 aa12.77□□□□□ -0.37
CTNS-202ENST00000381870 ASCC3Q8N3C0 2202 aaKnown RBP12.76□□□□□ -0.37
CTNS-202ENST00000381870 NKX6-3A6NJ46 265 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 OR5G3P0C626 314 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 MPLP40238 635 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 PAFAH1B2P68402 229 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 OR8G2PQ6IF36 304 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 ZNF709Q8N972 641 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 SGMS2Q8NHU3 365 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 RALGAPA1Q6GYQ0 2036 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 WDFY3Q8IZQ1 3526 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 TUSC2O75896 110 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 CRYAAP02489 173 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 SERPINE2P07093 398 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 DRD1P21728 446 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 FBLP22087 321 aaKnown RBP12.76□□□□□ -0.37
CTNS-202ENST00000381870 PMP22Q01453 160 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 TIPARPQ7Z3E1 657 aaKnown RBP12.76□□□□□ -0.37
CTNS-202ENST00000381870 ZNF114Q8NC26 417 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 ZNF837Q96EG3 531 aaPredicted RBP12.76□□□□□ -0.37
CTNS-202ENST00000381870 DERL1Q9BUN8 251 aa12.76□□□□□ -0.37
CTNS-202ENST00000381870 ITGB1BP1O14713 200 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 HS3ST1O14792 307 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 TLX3O43711 291 aaPredicted RBP12.75□□□□□ -0.37
CTNS-202ENST00000381870 IGKV1-39P01597 117 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 IGKV1D-39P04432 117 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 LHX2P50458 406 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 SLC38A11Q08AI6 406 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 MSMO1Q15800 293 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 AARDQ4LEZ3 155 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 OR5AU1Q8NGC0 362 aa12.75□□□□□ -0.37
CTNS-202ENST00000381870 ZNF501Q96CX3 271 aaPredicted RBP12.75□□□□□ -0.37
CTNS-202ENST00000381870 SPTY2D1-AS1A0A0U1RR47 76 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 CTXND1A0A1B0GTU2 59 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 CBLN1P23435 193 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 CDKN1BP46527 198 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 OR10G9Q8NGN4 311 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 OR10G7Q8NGN6 311 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 TECTBQ96PL2 329 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 ALKBH3Q96Q83 286 aaPredicted RBP12.74□□□□□ -0.37
CTNS-202ENST00000381870 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 LRRC61Q9BV99 259 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 IL36GQ9NZH8 169 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 FBXL7Q9UJT9 491 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 IGHV3-15A0A0B4J1V0 119 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 AQP7P3A6NL99 342 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 C11orf94C9JXX5 98 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 FOXL1Q12952 345 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 FFAR4Q5NUL3 377 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.74□□□□□ -0.37
CTNS-202ENST00000381870 PARM1Q6UWI2 310 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 FAM103A1Q9BTL3 118 aaKnown RBP12.74□□□□□ -0.37
CTNS-202ENST00000381870 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
CTNS-202ENST00000381870 CD300LBA8K4G0 201 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 RBFOX2O43251 390 aaKnown RBP eCLIP12.73□□□□□ -0.372e-6■□□□□ 9.3
CTNS-202ENST00000381870 NAPSAO96009 420 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 CD38P28907 300 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 EPHA8P29322 1005 aaPredicted RBP12.73□□□□□ -0.37
CTNS-202ENST00000381870 YPEL3P61236 119 aaPredicted RBP12.73□□□□□ -0.37
CTNS-202ENST00000381870 PLCXD3Q63HM9 321 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 PIGCQ92535 297 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 SAMD10Q9BYL1 202 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 HS3ST3A1Q9Y663 406 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 IGKV1-5P01602 117 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 SLC25A6P12236 298 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 CRISP2P16562 243 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 CRYGSP22914 178 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
CTNS-202ENST00000381870 KRTDAPP60985 99 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 GNB1P62873 340 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 SLC25A53Q5H9E4 307 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 LYG1Q8N1E2 194 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 ZNF611Q8N823 705 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 Q8N976 141 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 OR1L3Q8NH93 324 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 ORAOV1Q8WV07 137 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 MTIF3Q9H2K0 278 aaKnown RBP12.73□□□□□ -0.37
CTNS-202ENST00000381870 TRIOBPQ9H2D6 2365 aa12.73□□□□□ -0.37
CTNS-202ENST00000381870 CTRLP40313 264 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 BPIFB3P59826 476 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 SPATA45Q537H7 98 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 C10orf128Q5T292 105 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 ZNF468Q5VIY5 522 aaPredicted RBP12.72□□□□□ -0.37
CTNS-202ENST00000381870 TMEM42Q69YG0 159 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 PARD6GQ9BYG4 376 aaPredicted RBP12.72□□□□□ -0.37
CTNS-202ENST00000381870 TUBG2Q9NRH3 451 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 IL36RNQ9UBH0 155 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 SLC45A2Q9UMX9 530 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 TRIOO75962 3097 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms