RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ZNF581Q9P0T4 197 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 WSB1Q9Y6I7 421 aa12.43□□□□□ -0.42
VCX3A-201ENST00000381089 TRAV41A0A0B4J266 112 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 LCE6AA0A183 80 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 C12orf77C9JDV5 145 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 SLC31A2O15432 143 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 LANCL1O43813 399 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 GP9P14770 177 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 PPIFP30405 207 aaKnown RBP12.42□□□□□ -0.42
VCX3A-201ENST00000381089 RAB9AP51151 201 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 GNB1P62873 340 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 TBCEQ15813 527 aaPredicted RBP12.42□□□□□ -0.42
VCX3A-201ENST00000381089 SYT6Q5T7P8 510 aaPredicted RBP12.42□□□□□ -0.42
VCX3A-201ENST00000381089 RPL22L1Q6P5R6 122 aaKnown RBP12.42□□□□□ -0.42
VCX3A-201ENST00000381089 PRR18Q8N4B5 295 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 SVOPQ8N4V2 548 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF439Q8NDP4 499 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 OR10V1Q8NGI7 309 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 DCUN1D4Q92564 292 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 TMEM106AQ96A25 262 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 ACOT13Q9NPJ3 140 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 ETAA1Q9NY74 926 aa12.42□□□□□ -0.42
VCX3A-201ENST00000381089 MRPS28Q9Y2Q9 187 aaKnown RBP12.42□□□□□ -0.42
VCX3A-201ENST00000381089 G3V318 75 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 ATP6V0E1O15342 81 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 IGLV1-40P01703 118 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 HLA-DRB1P01911 266 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 SPNP16150 400 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 BDKRB2P30411 391 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 TAS2R43P59537 309 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 ACTBP60709 375 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 SLC22A6Q4U2R8 563 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 CCDC58Q4VC31 144 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 CT45A1Q5HYN5 189 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 ASPHD1Q5U4P2 390 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF367Q7RTV3 350 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 TSPAN14Q8NG11 270 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 OR13C5Q8NGS8 318 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 CT45A3Q8NHU0 189 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 CITED4Q96RK1 184 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 CST11Q9H112 138 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 KIAA1456Q9P272 454 aa12.41□□□□□ -0.42
VCX3A-201ENST00000381089 LINC01619G3V211 115 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 NBR2O15453 112 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 OGG1O15527 345 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 MRPS14O60783 128 aaKnown RBP12.4□□□□□ -0.42
VCX3A-201ENST00000381089 HBZP02008 142 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 OR8U9P0C7N5 309 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 CELP19835 753 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 ZNF134P52741 427 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 KIAA0141Q14154 515 aaPredicted RBP12.4□□□□□ -0.42
VCX3A-201ENST00000381089 NEDD8Q15843 81 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 DMKNQ6E0U4 476 aaPredicted RBP12.4□□□□□ -0.42
VCX3A-201ENST00000381089 FAM53AQ6NSI3 398 aaPredicted RBP12.4□□□□□ -0.42
VCX3A-201ENST00000381089 RGP1Q92546 391 aaPredicted RBP12.4□□□□□ -0.42
VCX3A-201ENST00000381089 GHSRQ92847 366 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 SMIM19Q96E16 107 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 OR2S2Q9NQN1 319 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 CKLFQ9UBR5 152 aa12.4□□□□□ -0.42
VCX3A-201ENST00000381089 FAM90A10PA6NDY2 464 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 CA11O75493 328 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 PSMB9P28065 219 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 LIPKQ5VXJ0 399 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 LIN54Q6MZP7 749 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 OR4K15Q8NH41 348 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 UFD1Q92890 307 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 DLX4Q92988 240 aaPredicted RBP12.39□□□□□ -0.43
VCX3A-201ENST00000381089 ISOC1Q96CN7 298 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 MRPS24Q96EL2 167 aaKnown RBP12.39□□□□□ -0.43
VCX3A-201ENST00000381089 OR4C12Q96R67 309 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 MGLLQ99685 303 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 ABHD14AQ9BUJ0 271 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 KCNIP1Q9NZI2 227 aa12.39□□□□□ -0.43
VCX3A-201ENST00000381089 A0A087WXM4 84 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 IGHV7-81A0A0B4J1V7 117 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 LDLRAD4O15165 306 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 RGS11O94810 467 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 BLVRBP30043 206 aaPredicted RBP12.38□□□□□ -0.43
VCX3A-201ENST00000381089 SLURP1P55000 103 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 PITPNAQ00169 270 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 MLLT11Q13015 90 aaPredicted RBP12.38□□□□□ -0.43
VCX3A-201ENST00000381089 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 C5orf64Q2M2E5 130 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 RAB12Q6IQ22 244 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 TCTEX1D1Q8N7M0 179 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 MINDY2Q8NBR6 621 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 OR1L1Q8NH94 360 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 PGLYRP3Q96LB9 341 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 TMED9Q9BVK6 235 aa12.38□□□□□ -0.43
VCX3A-201ENST00000381089 RCC2Q9P258 522 aaKnown RBP12.38□□□□□ -0.43
VCX3A-201ENST00000381089 A0A1W2PN81 502 aa12.37□□□□□ -0.43
VCX3A-201ENST00000381089 A0A1W2PP11 408 aa12.37□□□□□ -0.43
VCX3A-201ENST00000381089 ARPC1BO15143 372 aaKnown RBP12.37□□□□□ -0.43
VCX3A-201ENST00000381089 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
VCX3A-201ENST00000381089 SMIM18P0DKX4 95 aa12.37□□□□□ -0.43
VCX3A-201ENST00000381089 CD40LGP29965 261 aa12.37□□□□□ -0.43
VCX3A-201ENST00000381089 CHRNA7P36544 502 aa12.37□□□□□ -0.43
VCX3A-201ENST00000381089 TMEM267Q0VDI3 215 aaPredicted RBP12.37□□□□□ -0.43
VCX3A-201ENST00000381089 SRSF7Q16629 238 aaKnown RBP eCLIP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms