RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TMEM65Q6PI78 240 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 OR2AK2Q8NG84 335 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 NEDD4LQ96PU5 975 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 YPEL2Q96QA6 119 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 PARP11Q9NR21 331 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 ABRACLQ9P1F3 81 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 KIAA1456Q9P272 454 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 LRRC42Q9Y546 428 aa13.47□□□□□ -0.25
HMGN1-204ENST00000380749 NBR2O15453 112 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 GNAO1P09471 354 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 LY6G6FQ5SQ64 297 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 C6orf141Q5SZD1 244 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 BPIFB6Q8NFQ5 453 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 NABP2Q9BQ15 211 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 TMEM59Q9BXS4 323 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 PLCXD1Q9NUJ7 323 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 STEAP1Q9UHE8 339 aa13.46□□□□□ -0.25
HMGN1-204ENST00000380749 ATP6V0E1O15342 81 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 CHATP28329 748 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 HMGN3Q15651 99 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 RBM48Q5RL73 367 aaKnown RBP13.45□□□□□ -0.26
HMGN1-204ENST00000380749 GLT8D1Q68CQ7 371 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 FAM71F2Q6NXP2 309 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 ZNF833PQ6ZTB9 187 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 ODF3L1Q8IXM7 274 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 NANOGP1Q8N7R0 232 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 OR11H1Q8NG94 326 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 MYOZ3Q8TDC0 251 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 RBMXL1Q96E39 390 aaKnown RBP13.45□□□□□ -0.26
HMGN1-204ENST00000380749 MND1Q9BWT6 205 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 OR51J1Q9H342 316 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 DYNC2H1Q8NCM8 4307 aaKnown RBP13.45□□□□□ -0.26
HMGN1-204ENST00000380749 SAA2-SAA4A0A096LPE2 208 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 OR8U8P0C7N1 319 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 NHLRC4P0CG21 123 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-204ENST00000380749 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-204ENST00000380749 ECI1P42126 302 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 RPS27AP62979 156 aaKnown RBP13.45□□□□□ -0.26
HMGN1-204ENST00000380749 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-204ENST00000380749 C5orf64Q2M2E5 130 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 MOB1BQ7L9L4 216 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 MS4A15Q8N5U1 240 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 FBLIM1Q8WUP2 373 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 IL1F10Q8WWZ1 152 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 PHYHIPQ92561 330 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 UBE2E2Q96LR5 201 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 PRR25Q96S07 402 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 SULT4A1Q9BR01 284 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 VCXQ9H320 206 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 CHMP1AQ9HD42 196 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-204ENST00000380749 VSIG4Q9Y279 399 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 WSB1Q9Y6I7 421 aa13.45□□□□□ -0.26
HMGN1-204ENST00000380749 TRAV41A0A0B4J266 112 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 CNTFRP26992 372 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 PPIFP30405 207 aaKnown RBP13.44□□□□□ -0.26
HMGN1-204ENST00000380749 OR3A3P47888 321 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 ZNF260Q3ZCT1 412 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 ACSM3Q53FZ2 586 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 LAIR2Q6ISS4 152 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 SVOPQ8N4V2 548 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 KCNG3Q8TAE7 436 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 CYYR1Q96J86 154 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 TMED9Q9BVK6 235 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 ANKRD60Q9BZ19 345 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 PIPOXQ9P0Z9 390 aa13.44□□□□□ -0.26
HMGN1-204ENST00000380749 IGHV7-81A0A0B4J1V7 117 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 G3V318 75 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 VSIG8P0DPA2 414 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 BLVRBP30043 206 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-204ENST00000380749 INSL3P51460 131 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 RUNX1Q01196 453 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 ZNF616Q08AN1 781 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 INSL4Q14641 139 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 FAM27D1Q5T7N8 215 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 OR10K2Q6IF99 312 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 LIN54Q6MZP7 749 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 C6orf201Q7Z4U5 140 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 C5orf24Q7Z6I8 188 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 ZNF491Q8N8L2 437 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 NPBQ8NG41 125 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 OR1N2Q8NGR9 330 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 FAAP24Q9BTP7 215 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 IFI27L2Q9H2X8 130 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 GNB4Q9HAV0 340 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 FKBP14Q9NWM8 211 aa13.43□□□□□ -0.26
HMGN1-204ENST00000380749 ZNF256Q9Y2P7 627 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-204ENST00000380749 LSM4Q9Y4Z0 139 aaKnown RBP13.43□□□□□ -0.26
HMGN1-204ENST00000380749 I3L521 148 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 RAB29O14966 203 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 NDUFA3O95167 84 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 IGLV1-40P01703 118 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 CDK1P06493 297 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 HTR2CP28335 458 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 ECSCRQ19T08 205 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 HSD17B12Q53GQ0 312 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 C1orf100Q5SVJ3 147 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 OGFRL1Q5TC84 451 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-204ENST00000380749 FAM131AQ6UXB0 335 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 SETD6Q8TBK2 473 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 RITA1Q96K30 269 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms