RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 TNXAQ16473 311 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 ZNF645Q8N7E2 425 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 SSMEM1Q8WWF3 244 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 PRSS27Q9BQR3 290 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 TRAV9-1A0A075B6T8 112 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CDK2AP1O14519 115 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CD160O95971 181 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 DMRTC1Q5HYR2 192 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 SLC35E4Q6ICL7 350 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 OR10AC1Q8NH08 325 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 LOC102724200A0A096LPH7 203 aaPredicted RBP8.35□□□□□ -1.07
SNX1-202ENST00000380285 C21orf140B9A014 251 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CSN3P07498 182 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CD82P27701 267 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 IBA57Q5T440 356 aaKnown RBP8.35□□□□□ -1.07
SNX1-202ENST00000380285 SLC25A34Q6PIV7 304 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 OR8A1Q8NGG7 326 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 HES7Q9BYE0 225 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 TREM2Q9NZC2 230 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 RALGAPA1Q6GYQ0 2036 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 J3QR06 171 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 TMIGD3P0DMS9 266 aaPredicted RBP8.35□□□□□ -1.07
SNX1-202ENST00000380285 ZNF83P51522 516 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 LCN2P80188 198 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CEACAM21Q3KPI0 293 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 LHX8Q68G74 356 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CALHM1Q8IU99 346 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 C10orf111Q8N326 155 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 HIGD1AQ9Y241 93 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 UBR3Q6ZT12 1888 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 EIF3GO75821 320 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNX1-202ENST00000380285 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 HARBI1Q96MB7 349 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CHRNA10Q9GZZ6 450 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 RNF7Q9UBF6 113 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 OR51B2Q9Y5P1 312 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 KIF26BQ2KJY2 2108 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 OR2W5A6NFC9 320 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 OR4A8P0C604 315 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 CCDC144NLQ6NUI1 221 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 RBPMS2Q6ZRY4 209 aaKnown RBP8.34□□□□□ -1.07
SNX1-202ENST00000380285 VCX2Q9H322 139 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 PXMP4Q9Y6I8 212 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 NXPH1P58417 271 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 HYAL1Q12794 435 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 PIGYQ3MUY2 71 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 GFRALQ6UXV0 394 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 BHLHA15Q7RTS1 189 aaPredicted RBP8.34□□□□□ -1.07
SNX1-202ENST00000380285 BRWD1Q9NSI6 2320 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 TDHQ8IZJ6 230 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 RGP1Q92546 391 aaPredicted RBP8.34□□□□□ -1.07
SNX1-202ENST00000380285 TAF15Q92804 592 aaKnown RBP eCLIP8.34□□□□□ -1.07
SNX1-202ENST00000380285 PARD6GQ9BYG4 376 aaPredicted RBP8.34□□□□□ -1.07
SNX1-202ENST00000380285 A0A087WWC5 75 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 KIR2DL1P43626 348 aaPredicted RBP8.34□□□□□ -1.07
SNX1-202ENST00000380285 KIR2DL2P43627 348 aaPredicted RBP8.34□□□□□ -1.07
SNX1-202ENST00000380285 RELBQ01201 579 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 EIF4EBP2Q13542 120 aaPredicted RBP8.34□□□□□ -1.07
SNX1-202ENST00000380285 SPINK9Q5DT21 86 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 TGIF2LYQ8IUE0 185 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 LRRC75AQ8NAA5 344 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 GPA33Q99795 319 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 SCNM1Q9BWG6 230 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 TLNRD1Q9H1K6 362 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 ASCL3Q9NQ33 180 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 HYPMO75409 117 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 MYOGP15173 224 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 AGAP20933 346 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 DEFB109BQ30KR1 87 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 HIKESHIQ53FT3 197 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 AMMECR1LQ6DCA0 310 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 GCSAMQ8N6F7 178 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 OR4C12Q96R67 309 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 SERGEFQ9UGK8 458 aa8.34□□□□□ -1.07
SNX1-202ENST00000380285 LIFP15018 202 aa8.34□□□□□ -1.08
SNX1-202ENST00000380285 GGACTQ9BVM4 153 aa8.34□□□□□ -1.08
SNX1-202ENST00000380285 SF3B6Q9Y3B4 125 aaKnown RBP8.34□□□□□ -1.08
SNX1-202ENST00000380285 GBF1Q92538 1859 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 IGHV3-43A0A0B4J1X8 118 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 LEPROTL1O95214 131 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 IGHV3-43DP0DP04 118 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 FBXO17Q96EF6 278 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 TUBA4BQ9H853 241 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 WNT16Q9UBV4 365 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 A8MXK9 166 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 HLA-DRB1P01911 266 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 HOXD4P09016 255 aaPredicted RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 ZNF735P0CB33 412 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 MC5RP33032 325 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 P2RY4P51582 365 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 METAP1P53582 386 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 C1orf53Q5VUE5 145 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 OR8I2Q8N0Y5 310 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 SFRP2Q96HF1 295 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 SMIM8Q96KF7 97 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
SNX1-202ENST00000380285 PRR13Q9NZ81 148 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 M0R3E3 92 aa8.33□□□□□ -1.08
SNX1-202ENST00000380285 IGHMP01871 453 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms