RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 GTF3AQ92664 365 aaKnown RBP6.49□□□□□ -1.37
CDKL5-202ENST00000379996 HIST1H2BAQ96A08 127 aa6.49□□□□□ -1.37
CDKL5-202ENST00000379996 SEBOXQ9HB31 216 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-202ENST00000379996 OR2S2Q9NQN1 319 aa6.49□□□□□ -1.37
CDKL5-202ENST00000379996 GSKIPQ9P0R6 139 aa6.49□□□□□ -1.37
CDKL5-202ENST00000379996 ESPL1Q14674 2120 aa6.49□□□□□ -1.37
CDKL5-202ENST00000379996 ZGRF1Q86YA3 2104 aa6.49□□□□□ -1.37
CDKL5-202ENST00000379996 IGKV1D-13A0A0B4J2D9 117 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 C5orf52A6NGY3 159 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF98A6NK75 572 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 UBE2CO00762 179 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 CDS2O95674 445 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 IGHV2-5P01817 119 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 ADH4P08319 380 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 IGKV1-13P0DP09 117 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 DUSP1P28562 367 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 EFNB3Q15768 340 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 GAPTQ8N292 157 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF611Q8N823 705 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 SECTM1Q8WVN6 248 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 JMJD8Q96S16 334 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 TMED3Q9Y3Q3 217 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 DEFB108AA8MXU0 73 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 NPIPB11E5RHQ5 1161 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 MPPED1O15442 326 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 AGFG2O95081 481 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 PTBP3O95758 552 aaKnown RBP6.48□□□□□ -1.37
CDKL5-202ENST00000379996 CRYAAP02489 173 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF44P15621 663 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 UCP1P25874 307 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 IDH3GP51553 393 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-202ENST00000379996 FGF12P61328 243 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 PPP1CBP62140 327 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 EWSR1Q01844 656 aaKnown RBP eCLIP6.48□□□□□ -1.37
CDKL5-202ENST00000379996 NHLH2Q02577 135 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 MIDNQ504T8 468 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF818PQ6ZRF7 136 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 MTCH1Q9NZJ7 389 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 TAAR3PQ9P1P4 343 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 IL36RNQ9UBH0 155 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 C3orf85A0A1B0GTC6 90 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 DUXBA0A1W2PPF3 345 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 DPRXA6NFQ7 191 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 SHISA9B4DS77 424 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 PRSS44E7EML9 344 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF561-AS1K7EIQ3 104 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 ZG16O60844 167 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 IGHV3-13P01766 116 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 PVALBP20472 110 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-202ENST00000379996 BCL3P20749 454 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 FUT3P21217 361 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 CD80P33681 288 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 EIF5AL1Q6IS14 154 aaKnown RBP6.48□□□□□ -1.37
CDKL5-202ENST00000379996 FAM185AQ8N0U4 392 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 BORCS8Q96FH0 119 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 CLCC1Q96S66 551 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 CABLES2Q9BTV7 478 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF286AQ9HBT8 521 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 TREM1Q9NP99 234 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 LYRM2Q9NU23 88 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-202ENST00000379996 LSM5Q9Y4Y9 91 aaKnown RBP6.48□□□□□ -1.37
CDKL5-202ENST00000379996 RFNGQ9Y644 331 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 KPTNQ9Y664 436 aa6.48□□□□□ -1.37
CDKL5-202ENST00000379996 UBR5O95071 2799 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-202ENST00000379996 LCATP04180 440 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 LGI3Q8N145 548 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 MRPL30Q8TCC3 161 aaKnown RBP6.47□□□□□ -1.37
CDKL5-202ENST00000379996 AKR1E2Q96JD6 320 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 C19orf12Q9NSK7 152 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 MPC1Q9Y5U8 109 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 POLEQ07864 2286 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF732B4DXR9 585 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-202ENST00000379996 M0R1B8 84 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 DIRAS3O95661 229 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 ACAA1P09110 424 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-202ENST00000379996 RAB5CP51148 216 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF83P51522 516 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 HMGN3Q15651 99 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 CEACAM21Q3KPI0 293 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 PHLDA2Q53GA4 152 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 AVPI1Q5T686 147 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 IL22RA2Q969J5 263 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 STRAPQ9Y3F4 350 aaKnown RBP6.47□□□□□ -1.37
CDKL5-202ENST00000379996 H7C2Y5 167 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 MMP9P14780 707 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 BSPH1Q075Z2 132 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 GUK1Q16774 197 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 AWAT1Q58HT5 328 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 TBC1D26Q86UD7 250 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 S100A13Q99584 98 aa6.47□□□□□ -1.37
CDKL5-202ENST00000379996 SAV1Q9H4B6 383 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-202ENST00000379996 FAM212BQ9NTI7 297 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-202ENST00000379996 A0A0G2JRQ6 117 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 A0A1W2PPE3 182 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 A0A1W2PR80 420 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 ZNF850A8MQ14 1090 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 J3QKU1 62 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 NGFP01138 241 aa6.46□□□□□ -1.37
CDKL5-202ENST00000379996 IFNA21P01568 189 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms