RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CXCL2P19875 107 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 ITGB1BP1O14713 200 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 RRN3P1Q2M238 152 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 TMEM211Q6ICI0 200 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 ZNF774Q6NX45 483 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 CD300LDQ6UXZ3 194 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 MDP1Q86V88 176 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 LYG1Q8N1E2 194 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 GRIFINA4D1Z8 144 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 TNFSF13O75888 250 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 C15orf39Q6ZRI6 1047 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 ANKRD33Q7Z3H0 272 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 PIANPQ8IYJ0 282 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 WDTC1Q8N5D0 677 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 TEX37Q96LM6 180 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 SCNM1Q9BWG6 230 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 ASB1Q9Y576 335 aa7.69□□□□□ -1.18
LIG3-202ENST00000378526 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.68□□□□□ -1.18
LIG3-202ENST00000378526 DUTP33316 252 aaKnown RBP7.68□□□□□ -1.18
LIG3-202ENST00000378526 APOOQ9BUR5 198 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 LAMB2P55268 1798 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 GFYI3L273 518 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 PPP6CO00743 305 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 CA6P23280 308 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 TMEM50BP56557 158 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 ALKBH6Q3KRA9 238 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 LHX8Q68G74 356 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 LRTM2Q8N967 370 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 NOXO1Q8NFA2 376 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 C12orf49Q9H741 205 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 PRSS38A1L453 326 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 OGG1O15527 345 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 PRSS36Q5K4E3 855 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 GOLT1AQ6ZVE7 132 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 FBXL14Q8N1E6 418 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 TMEM106BQ9NUM4 274 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 DOCK3Q8IZD9 2030 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 hADV38S2A0JD32 116 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 GAGE1Q13065 139 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 TP53I13Q8NBR0 393 aaPredicted RBP7.68□□□□□ -1.18
LIG3-202ENST00000378526 OR4D11Q8NGI4 311 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 PLPPR1Q8TBJ4 325 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 ABHD14AQ9BUJ0 271 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 VWC2LB2RUY7 222 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 PTGESO14684 152 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 NDUFB3O43676 98 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 PEX11BO96011 259 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 MMD2Q8IY49 270 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 DYNLRB2Q8TF09 96 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 ZNF296Q8WUU4 475 aaPredicted RBP7.68□□□□□ -1.18
LIG3-202ENST00000378526 RGPD1P0DJD0 1748 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 HYPMO75409 117 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 SNAI1O95863 264 aaPredicted RBP7.68□□□□□ -1.18
LIG3-202ENST00000378526 OR3A4PP47883 348 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 C1RLQ9NZP8 487 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 ONECUT1Q9UBC0 465 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 LINC01387J3KSC0 135 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 ZFPL1O95159 310 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 EML2O95834 649 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 KLK2P20151 261 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 CYB561P49447 251 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 RTN4RL2Q86UN3 420 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 GPR82Q96P67 336 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 MRPL20Q9BYC9 149 aaKnown RBP7.68□□□□□ -1.18
LIG3-202ENST00000378526 B9D1Q9UPM9 204 aa7.68□□□□□ -1.18
LIG3-202ENST00000378526 NCOR1O75376 2440 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 LINC01553A4QN01 128 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 A8MXK9 166 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 LDLRAD4O15165 306 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 SLC16A11Q8NCK7 471 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 ERG28Q9UKR5 140 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 PXMP4Q9Y6I8 212 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 TRBV20-1A0A075B6N2 111 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 CDK2AP2O75956 126 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 PPYP01298 95 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 SLC25A30Q5SVS4 291 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 ST6GALNAC3Q8NDV1 305 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 GPR35Q9HC97 309 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 NXT2Q9NPJ8 142 aaKnown RBP7.67□□□□□ -1.18
LIG3-202ENST00000378526 AURKAIP1Q9NWT8 199 aaPredicted RBP7.67□□□□□ -1.18
LIG3-202ENST00000378526 NUP188Q5SRE5 1749 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 NAPSAO96009 420 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 SUMO3P55854 103 aaPredicted RBP7.67□□□□□ -1.18
LIG3-202ENST00000378526 HARBI1Q96MB7 349 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 IL36BQ9NZH7 164 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 CACNG4Q9UBN1 327 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 PPIL1Q9Y3C6 166 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 ANK1P16157 1881 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 IGHV1-69-2A0A0G2JMI3 117 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 M0R2P5 195 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 ANOS1P23352 680 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 CEACAM21Q3KPI0 293 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 CHCHD1Q96BP2 118 aaKnown RBP7.67□□□□□ -1.18
LIG3-202ENST00000378526 TRMT61AQ96FX7 289 aaKnown RBP7.67□□□□□ -1.18
LIG3-202ENST00000378526 SMCHD1A6NHR9 2005 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 XRN1Q8IZH2 1706 aaKnown RBP7.67□□□□□ -1.18
LIG3-202ENST00000378526 CEP250Q9BV73 2442 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 SPRY1O43609 319 aaPredicted RBP7.67□□□□□ -1.18
LIG3-202ENST00000378526 DPM2O94777 84 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 HOXC4P09017 264 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms